RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C PPX1P38698 397 aa2.15□□□□□ -2.06
BRE1YDL074C YHL041WP38730 149 aa2.15□□□□□ -2.06
BRE1YDL074C BEM4P39011 633 aa2.15□□□□□ -2.06
BRE1YDL074C YJL206CP39529 758 aa2.15□□□□□ -2.06
BRE1YDL074C FIR1P40020 876 aa2.15□□□□□ -2.06
BRE1YDL074C PRK1P40494 810 aa2.15□□□□□ -2.06
BRE1YDL074C YIL001WP40560 513 aa2.15□□□□□ -2.06
BRE1YDL074C SKP2P42843 763 aa2.15□□□□□ -2.06
BRE1YDL074C SPO74P45819 413 aa2.15□□□□□ -2.06
BRE1YDL074C YJL045WP47052 634 aa2.15□□□□□ -2.06
BRE1YDL074C CCT8P47079 568 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C VPS25P47142 202 aa2.15□□□□□ -2.06
BRE1YDL074C MRX6P48564 524 aa2.15□□□□□ -2.06
BRE1YDL074C VMA10P48836 114 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C GCV2P49095 1034 aa2.15□□□□□ -2.06
BRE1YDL074C CTR1P49573 406 aa2.15□□□□□ -2.06
BRE1YDL074C RPL4BP49626 362 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C MIG2P53035 382 aa2.15□□□□□ -2.06
BRE1YDL074C SCW11P53189 542 aa2.15□□□□□ -2.06
BRE1YDL074C NOP15P53927 220 aaPredicted RBP2.15□□□□□ -2.06
BRE1YDL074C EFM6P53970 246 aa2.15□□□□□ -2.06
BRE1YDL074C UBX4P54730 416 aa2.15□□□□□ -2.06
BRE1YDL074C NHP10Q03435 203 aa2.15□□□□□ -2.06
BRE1YDL074C ENT5Q03769 411 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C HMO1Q03973 246 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C YDR109CQ04585 715 aa2.15□□□□□ -2.06
BRE1YDL074C ESC8Q08119 714 aa2.15□□□□□ -2.06
BRE1YDL074C DIS3Q08162 1001 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C ALR1Q08269 859 aa2.15□□□□□ -2.06
BRE1YDL074C VPS54Q12071 889 aa2.15□□□□□ -2.06
BRE1YDL074C RUP1Q12242 671 aa2.15□□□□□ -2.06
BRE1YDL074C HRT3Q12347 344 aa2.15□□□□□ -2.06
BRE1YDL074C SEC39Q12745 709 aa2.15□□□□□ -2.06
BRE1YDL074C RGS2Q99188 309 aa2.15□□□□□ -2.06
BRE1YDL074C UBR2Q07963 1872 aa2.15□□□□□ -2.07
BRE1YDL074C ATP1P07251 545 aaKnown RBP2.15□□□□□ -2.07
BRE1YDL074C MPH2P0CD99 609 aa2.15□□□□□ -2.07
BRE1YDL074C ERR1P0CX10 437 aa2.15□□□□□ -2.07
BRE1YDL074C ERR2P0CX11 437 aa2.15□□□□□ -2.07
BRE1YDL074C INO1P11986 533 aa2.15□□□□□ -2.07
BRE1YDL074C GCY1P14065 312 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
BRE1YDL074C BAS1P22035 811 aa2.15□□□□□ -2.07
BRE1YDL074C SNT1P25357 1226 aa2.15□□□□□ -2.07
BRE1YDL074C RSA4P25382 515 aaKnown RBP2.15□□□□□ -2.07
BRE1YDL074C ATP7P30902 174 aa2.15□□□□□ -2.07
BRE1YDL074C PHA2P32452 334 aa2.15□□□□□ -2.07
BRE1YDL074C SMI1P32566 505 aa2.15□□□□□ -2.07
BRE1YDL074C TKL2P33315 681 aa2.15□□□□□ -2.07
BRE1YDL074C HSP78P33416 811 aa2.15□□□□□ -2.07
BRE1YDL074C TFC3P34111 1160 aa2.15□□□□□ -2.07
BRE1YDL074C YBR032WP38223 100 aa2.15□□□□□ -2.07
BRE1YDL074C YBR062CP38239 180 aa2.15□□□□□ -2.07
BRE1YDL074C HSL7P38274 827 aa2.15□□□□□ -2.07
BRE1YDL074C YBR259WP38338 688 aa2.15□□□□□ -2.07
BRE1YDL074C RFC3P38629 340 aa2.15□□□□□ -2.07
BRE1YDL074C YHL026CP38740 315 aa2.15□□□□□ -2.07
BRE1YDL074C BZZ1P38822 633 aa2.15□□□□□ -2.07
BRE1YDL074C LAM1P38851 1228 aa2.15□□□□□ -2.07
BRE1YDL074C PAC1P39946 494 aaKnown RBP2.15□□□□□ -2.07
BRE1YDL074C MMF1P40185 145 aaKnown RBP2.15□□□□□ -2.07
BRE1YDL074C ALG5P40350 334 aa2.15□□□□□ -2.07
BRE1YDL074C JEM1P40358 645 aa2.15□□□□□ -2.07
BRE1YDL074C PSF2P40359 213 aa2.15□□□□□ -2.07
BRE1YDL074C ERR3P42222 437 aa2.15□□□□□ -2.07
BRE1YDL074C MDJ2P42834 146 aa2.15□□□□□ -2.07
BRE1YDL074C ROK1P45818 564 aaPredicted RBP2.15□□□□□ -2.07
BRE1YDL074C POL31P46957 487 aa2.15□□□□□ -2.07
BRE1YDL074C TRF5P48561 642 aaKnown RBP2.15□□□□□ -2.07
BRE1YDL074C PAN2P53010 1115 aaPredicted RBP2.15□□□□□ -2.07
BRE1YDL074C MRM2P53123 320 aa2.15□□□□□ -2.07
BRE1YDL074C STP1Q00947 519 aa2.15□□□□□ -2.07
BRE1YDL074C UBP2Q01476 1272 aa2.15□□□□□ -2.07
BRE1YDL074C RSC4Q02206 625 aa2.15□□□□□ -2.07
BRE1YDL074C FMP30Q02883 468 aa2.15□□□□□ -2.07
BRE1YDL074C TFB2Q02939 513 aa2.15□□□□□ -2.07
BRE1YDL074C RCR2Q03446 210 aaKnown RBP2.15□□□□□ -2.07
BRE1YDL074C HPT1Q04178 221 aaKnown RBP2.15□□□□□ -2.07
BRE1YDL074C AIM32Q04689 311 aa2.15□□□□□ -2.07
BRE1YDL074C JIP5Q06214 492 aaPredicted RBP2.15□□□□□ -2.07
BRE1YDL074C YSH1Q06224 779 aaPredicted RBP2.15□□□□□ -2.07
BRE1YDL074C YLR177WQ06251 628 aa2.15□□□□□ -2.07
BRE1YDL074C BCP1Q06338 283 aa2.15□□□□□ -2.07
BRE1YDL074C RSC2Q06488 889 aa2.15□□□□□ -2.07
BRE1YDL074C YET3Q07451 203 aa2.15□□□□□ -2.07
BRE1YDL074C GPM2Q12008 311 aa2.15□□□□□ -2.07
BRE1YDL074C MCD1Q12158 566 aa2.15□□□□□ -2.07
BRE1YDL074C NBP2Q12163 236 aa2.15□□□□□ -2.07
BRE1YDL074C REC8Q12188 680 aa2.15□□□□□ -2.07
BRE1YDL074C SVS1Q12254 260 aa2.15□□□□□ -2.07
BRE1YDL074C NOT5Q12514 560 aaPredicted RBP2.15□□□□□ -2.07
BRE1YDL074C AI5_ALPHAQ9ZZX1 630 aa2.15□□□□□ -2.07
BRE1YDL074C HIS1P00498 297 aaKnown RBP2.14□□□□□ -2.07
BRE1YDL074C COX4P04037 155 aa2.14□□□□□ -2.07
BRE1YDL074C RAD10P06838 210 aa2.14□□□□□ -2.07
BRE1YDL074C MIS1P09440 975 aaKnown RBP2.14□□□□□ -2.07
BRE1YDL074C GCD2P12754 651 aaPredicted RBP2.14□□□□□ -2.07
BRE1YDL074C NMT1P14743 455 aa2.14□□□□□ -2.07
BRE1YDL074C RPB4P20433 221 aaPredicted RBP2.14□□□□□ -2.07
BRE1YDL074C REC107P21651 314 aa2.14□□□□□ -2.07
BRE1YDL074C MRPS28P21771 286 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 154.7 ms