RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W MFM1Q02783 413 aa2.37□□□□□ -2.03
MCD1YDL003W CEF1Q03654 590 aaPredicted RBP2.37□□□□□ -2.03
MCD1YDL003W INP2Q03824 705 aa2.37□□□□□ -2.03
MCD1YDL003W YKU80Q04437 629 aa2.37□□□□□ -2.03
MCD1YDL003W CFT2Q12102 859 aaPredicted RBP2.37□□□□□ -2.03
MCD1YDL003W ATG9Q12142 997 aa2.37□□□□□ -2.03
MCD1YDL003W ZPS1Q12512 249 aa2.37□□□□□ -2.03
MCD1YDL003W CAT8P39113 1433 aa2.36□□□□□ -2.03
MCD1YDL003W GDB1Q06625 1536 aa2.36□□□□□ -2.03
MCD1YDL003W NAT1P12945 854 aaKnown RBP2.36□□□□□ -2.03
MCD1YDL003W CLN1P20437 546 aa2.36□□□□□ -2.03
MCD1YDL003W FAR1P21268 830 aa2.36□□□□□ -2.03
MCD1YDL003W RPL5P26321 297 aaKnown RBP2.36□□□□□ -2.03
MCD1YDL003W MSS1P32559 526 aaPredicted RBP2.36□□□□□ -2.03
MCD1YDL003W MUD2P36084 527 aaKnown RBP2.36□□□□□ -2.03
MCD1YDL003W BRN1P38170 754 aa2.36□□□□□ -2.03
MCD1YDL003W YSW1P38280 609 aa2.36□□□□□ -2.03
MCD1YDL003W ERC1P38767 581 aa2.36□□□□□ -2.03
MCD1YDL003W SSZ1P38788 538 aaKnown RBP2.36□□□□□ -2.03
MCD1YDL003W DOT6P40059 670 aaKnown RBP2.36□□□□□ -2.03
MCD1YDL003W MAF1P41910 395 aa2.36□□□□□ -2.03
MCD1YDL003W GCN20P43535 752 aaKnown RBP2.36□□□□□ -2.03
MCD1YDL003W TRS85P46944 698 aa2.36□□□□□ -2.03
MCD1YDL003W CTK3P46963 296 aaPredicted RBP2.36□□□□□ -2.03
MCD1YDL003W YJR142WP47173 342 aa2.36□□□□□ -2.03
MCD1YDL003W SDA1P53313 767 aaKnown RBP2.36□□□□□ -2.03
MCD1YDL003W SNF12P53628 566 aa2.36□□□□□ -2.03
MCD1YDL003W COG6P53959 839 aa2.36□□□□□ -2.03
MCD1YDL003W RSC9Q03124 581 aa2.36□□□□□ -2.03
MCD1YDL003W HOT1Q03213 719 aa2.36□□□□□ -2.03
MCD1YDL003W GIR2Q03768 265 aaPredicted RBP2.36□□□□□ -2.03
MCD1YDL003W NUP53Q03790 475 aa2.36□□□□□ -2.03
MCD1YDL003W FAR8Q05040 523 aa2.36□□□□□ -2.03
MCD1YDL003W ATG23Q06671 453 aa2.36□□□□□ -2.03
MCD1YDL003W IZH3Q07959 543 aa2.36□□□□□ -2.03
MCD1YDL003W SDH5Q08230 162 aa2.36□□□□□ -2.03
MCD1YDL003W YRF1-4O13559 1382 aa2.36□□□□□ -2.03
MCD1YDL003W LYS2P07702 1392 aa2.36□□□□□ -2.03
MCD1YDL003W KRE5P22023 1365 aa2.36□□□□□ -2.03
MCD1YDL003W YML133CQ03099 1374 aa2.36□□□□□ -2.03
MCD1YDL003W YLL067CQ07888 1374 aa2.36□□□□□ -2.03
MCD1YDL003W AUS1Q08409 1394 aa2.36□□□□□ -2.03
MCD1YDL003W YLL066CQ99208 1374 aa2.36□□□□□ -2.03
MCD1YDL003W TY3B-IQ7LHG5 1498 aaKnown RBP2.36□□□□□ -2.03
MCD1YDL003W PDR18P53756 1333 aa2.35□□□□□ -2.03
MCD1YDL003W RAD1P06777 1100 aa2.35□□□□□ -2.03
MCD1YDL003W PMR1P13586 950 aa2.35□□□□□ -2.03
MCD1YDL003W KRS1P15180 591 aaKnown RBP2.35□□□□□ -2.03
MCD1YDL003W PRP16P15938 1071 aaPredicted RBP2.35□□□□□ -2.03
MCD1YDL003W PMA2P19657 947 aa2.35□□□□□ -2.03
MCD1YDL003W TYR1P20049 452 aa2.35□□□□□ -2.03
MCD1YDL003W SPE2P21182 396 aa2.35□□□□□ -2.03
MCD1YDL003W YJU2P28320 278 aaPredicted RBP2.35□□□□□ -2.03
MCD1YDL003W PRX1P34227 261 aaKnown RBP2.35□□□□□ -2.03
MCD1YDL003W ECM4P36156 370 aa2.35□□□□□ -2.03
MCD1YDL003W FES1P38260 290 aa2.35□□□□□ -2.03
MCD1YDL003W YNG2P38806 282 aaKnown RBP2.35□□□□□ -2.03
MCD1YDL003W VPS8P39702 1274 aa2.35□□□□□ -2.03
MCD1YDL003W SWD1P39706 426 aa2.35□□□□□ -2.03
MCD1YDL003W GDH3P39708 457 aa2.35□□□□□ -2.03
MCD1YDL003W NOC2P39744 710 aaKnown RBP2.35□□□□□ -2.03
MCD1YDL003W YAT2P40017 923 aa2.35□□□□□ -2.03
MCD1YDL003W INA22P40576 216 aa2.35□□□□□ -2.03
MCD1YDL003W PXA1P41909 870 aa2.35□□□□□ -2.03
MCD1YDL003W MAL13P53338 473 aa2.35□□□□□ -2.03
MCD1YDL003W YNL144CP53907 740 aa2.35□□□□□ -2.03
MCD1YDL003W POB3Q04636 552 aaKnown RBP2.35□□□□□ -2.03
MCD1YDL003W MRD1Q06106 887 aaKnown RBP2.35□□□□□ -2.03
MCD1YDL003W VHS3Q08438 674 aa2.35□□□□□ -2.03
MCD1YDL003W PSK1P31374 1356 aa2.34□□□□□ -2.03
MCD1YDL003W YPR089WO13585 888 aa2.34□□□□□ -2.03
MCD1YDL003W UBC1P21734 215 aaKnown RBP2.34□□□□□ -2.03
MCD1YDL003W CDC15P27636 974 aa2.34□□□□□ -2.03
MCD1YDL003W HIR2P32480 875 aa2.34□□□□□ -2.03
MCD1YDL003W LOS1P33418 1100 aaPredicted RBP2.34□□□□□ -2.03
MCD1YDL003W KAP123P40069 1113 aaKnown RBP2.34□□□□□ -2.03
MCD1YDL003W VID27P40157 782 aa2.34□□□□□ -2.03
MCD1YDL003W GVP36P40531 326 aaKnown RBP2.34□□□□□ -2.03
MCD1YDL003W SAP185P40856 1058 aa2.34□□□□□ -2.03
MCD1YDL003W SGM1P47166 707 aa2.34□□□□□ -2.03
MCD1YDL003W ENP2P48234 707 aaKnown RBP2.34□□□□□ -2.03
MCD1YDL003W YGL242CP53066 181 aa2.34□□□□□ -2.03
MCD1YDL003W IDP3P53982 420 aaKnown RBP2.34□□□□□ -2.03
MCD1YDL003W ARP4P80428 489 aa2.34□□□□□ -2.03
MCD1YDL003W GTR1Q00582 310 aa2.34□□□□□ -2.03
MCD1YDL003W YML119WQ03208 357 aa2.34□□□□□ -2.03
MCD1YDL003W YML108WQ03759 105 aa2.34□□□□□ -2.03
MCD1YDL003W PLP1Q04004 230 aa2.34□□□□□ -2.03
MCD1YDL003W MGR3Q04472 501 aa2.34□□□□□ -2.03
MCD1YDL003W VBA4Q04602 768 aaKnown RBP2.34□□□□□ -2.03
MCD1YDL003W ATG17Q06410 417 aa2.34□□□□□ -2.03
MCD1YDL003W SPN1Q06505 410 aaPredicted RBP2.34□□□□□ -2.03
MCD1YDL003W RTP1Q12751 981 aa2.34□□□□□ -2.03
MCD1YDL003W ESC1Q03661 1658 aaKnown RBP2.34□□□□□ -2.03
MCD1YDL003W SIR4P11978 1358 aa2.34□□□□□ -2.04
MCD1YDL003W RPL7AP05737 244 aaKnown RBP2.34□□□□□ -2.04
MCD1YDL003W CDC16P09798 840 aa2.34□□□□□ -2.04
MCD1YDL003W AQY1P0CD91 305 aa2.34□□□□□ -2.04
MCD1YDL003W GSY1P23337 708 aa2.34□□□□□ -2.04
MCD1YDL003W PRD1P25375 712 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms