RNA–Protein interactions for RNA: Q0140

VAR1, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene VAR1, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAR1	Q0140	PLC1	P32383	869 aa		3.95	□□□□□ -1.78
VAR1	Q0140	DHH1	P39517	506 aa	Known RBP	3.95	□□□□□ -1.78
VAR1	Q0140	MAM1	P40065	302 aa		3.95	□□□□□ -1.78
VAR1	Q0140	RAD26	P40352	1085 aa		3.95	□□□□□ -1.78
VAR1	Q0140	NOP2	P40991	618 aa	Known RBP	3.95	□□□□□ -1.78
VAR1	Q0140	DNM1	P54861	757 aa		3.95	□□□□□ -1.78
VAR1	Q0140	YMR034C	Q05131	434 aa	Predicted RBP	3.95	□□□□□ -1.78
VAR1	Q0140	RAD34	Q06665	692 aa		3.95	□□□□□ -1.78
VAR1	Q0140	MLH2	Q07980	695 aa		3.95	□□□□□ -1.78
VAR1	Q0140	PFA4	Q12006	378 aa		3.95	□□□□□ -1.78
VAR1	Q0140	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
VAR1	Q0140	AMD2	P22580	549 aa		3.94	□□□□□ -1.78
VAR1	Q0140	CWH43	P25618	953 aa		3.94	□□□□□ -1.78
VAR1	Q0140	RNR4	P49723	345 aa	Known RBP	3.94	□□□□□ -1.78
VAR1	Q0140	MDR1	P53258	950 aa		3.94	□□□□□ -1.78
VAR1	Q0140	ALG12	P53730	551 aa		3.94	□□□□□ -1.78
VAR1	Q0140	YML119W	Q03208	357 aa		3.94	□□□□□ -1.78
VAR1	Q0140	Q0010	Q9ZZX9	128 aa		3.94	□□□□□ -1.78
VAR1	Q0140	SEC18	P18759	758 aa	Known RBP	3.93	□□□□□ -1.78
VAR1	Q0140	UBP16	Q02863	499 aa		3.93	□□□□□ -1.78
VAR1	Q0140	ARA2	Q04212	335 aa		3.93	□□□□□ -1.78
VAR1	Q0140	PLM2	Q04383	521 aa		3.93	□□□□□ -1.78
VAR1	Q0140	FPR4	Q06205	392 aa	Predicted RBP	3.93	□□□□□ -1.78
VAR1	Q0140	LCB4	Q12246	624 aa		3.93	□□□□□ -1.78
VAR1	Q0140	VPS5	Q92331	675 aa		3.93	□□□□□ -1.78
VAR1	Q0140	CNA1	P23287	553 aa		3.92	□□□□□ -1.78
VAR1	Q0140	SRP68	P38687	599 aa	Known RBP	3.92	□□□□□ -1.78
VAR1	Q0140	SAP1	P39955	897 aa	Known RBP	3.92	□□□□□ -1.78
VAR1	Q0140	YIL169C	P40442	995 aa		3.92	□□□□□ -1.78
VAR1	Q0140	RRI1	Q12468	440 aa		3.92	□□□□□ -1.78
VAR1	Q0140	ATP12	P22135	325 aa		3.91	□□□□□ -1.78
VAR1	Q0140	VPS8	P39702	1274 aa		3.91	□□□□□ -1.78
VAR1	Q0140	YPT11	P48559	417 aa		3.91	□□□□□ -1.78
VAR1	Q0140	COS12	P53053	380 aa		3.91	□□□□□ -1.78
VAR1	Q0140	UME1	Q03010	460 aa		3.91	□□□□□ -1.78
VAR1	Q0140	ERV46	P39727	415 aa		3.9	□□□□□ -1.79
VAR1	Q0140	AZF1	P41696	914 aa		3.9	□□□□□ -1.79
VAR1	Q0140	IRC5	P43610	853 aa		3.9	□□□□□ -1.79
VAR1	Q0140	PMT3	P47190	753 aa		3.9	□□□□□ -1.79
VAR1	Q0140	ECM22	Q05958	814 aa	Predicted RBP	3.9	□□□□□ -1.79
VAR1	Q0140	YFL068W	P0CX99	160 aa		3.89	□□□□□ -1.79
VAR1	Q0140	YLL066W-A	P0CY00	160 aa		3.89	□□□□□ -1.79
VAR1	Q0140	YLL067W-A	P0CY01	160 aa		3.89	□□□□□ -1.79
VAR1	Q0140	PPG1	P32838	368 aa		3.89	□□□□□ -1.79
VAR1	Q0140	YJL107C	P42947	387 aa		3.89	□□□□□ -1.79
VAR1	Q0140	YTA7	P40340	1379 aa		3.89	□□□□□ -1.79
VAR1	Q0140	ARG1	P22768	420 aa		3.88	□□□□□ -1.79
VAR1	Q0140	SER1	P33330	395 aa	Known RBP	3.88	□□□□□ -1.79
VAR1	Q0140	PEA2	P40091	420 aa		3.88	□□□□□ -1.79
VAR1	Q0140	VRG4	P40107	337 aa		3.88	□□□□□ -1.79
VAR1	Q0140	GPP1	P41277	250 aa	Known RBP	3.88	□□□□□ -1.79
VAR1	Q0140	YNL144C	P53907	740 aa		3.88	□□□□□ -1.79
VAR1	Q0140	UTP14	Q04500	899 aa	Known RBP	3.88	□□□□□ -1.79
VAR1	Q0140	YML053C	Q04978	212 aa		3.88	□□□□□ -1.79
VAR1	Q0140	YDL242W	Q07746	117 aa		3.88	□□□□□ -1.79
VAR1	Q0140	GSH2	Q08220	491 aa		3.88	□□□□□ -1.79
VAR1	Q0140	SAD1	P43589	448 aa		3.87	□□□□□ -1.79
VAR1	Q0140	ORC5	P50874	479 aa		3.87	□□□□□ -1.79
VAR1	Q0140	MNT2	P53059	558 aa		3.87	□□□□□ -1.79
VAR1	Q0140	GPG1	P53130	126 aa		3.87	□□□□□ -1.79
VAR1	Q0140	RNH70	P53331	553 aa		3.87	□□□□□ -1.79
VAR1	Q0140	YOR378W	Q08902	515 aa		3.87	□□□□□ -1.79
VAR1	Q0140	NUP145	P49687	1317 aa		3.87	□□□□□ -1.79
VAR1	Q0140	SES1	P07284	462 aa	Known RBP	3.86	□□□□□ -1.79
VAR1	Q0140	KGD2	P19262	463 aa	Predicted RBP	3.86	□□□□□ -1.79
VAR1	Q0140	LSB5	P25369	354 aa		3.86	□□□□□ -1.79
VAR1	Q0140	LNP1	P38878	278 aa		3.86	□□□□□ -1.79
VAR1	Q0140	YAT1	P80235	687 aa		3.86	□□□□□ -1.79
VAR1	Q0140	ACS1	Q01574	713 aa		3.86	□□□□□ -1.79
VAR1	Q0140	FCP1	Q03254	732 aa		3.86	□□□□□ -1.79
VAR1	Q0140	YER175W-A	Q8TGU4	54 aa		3.86	□□□□□ -1.79
VAR1	Q0140	PPZ1	P26570	692 aa		3.85	□□□□□ -1.79
VAR1	Q0140	STB5	P38699	743 aa		3.85	□□□□□ -1.79
VAR1	Q0140	ARN1	P38731	627 aa		3.85	□□□□□ -1.79
VAR1	Q0140	YPR027C	Q12079	277 aa		3.85	□□□□□ -1.79
VAR1	Q0140	SAN1	P22470	610 aa		3.84	□□□□□ -1.79
VAR1	Q0140	BET4	Q00618	327 aa		3.84	□□□□□ -1.79
VAR1	Q0140	DIG1	Q03063	452 aa	Known RBP	3.84	□□□□□ -1.79
VAR1	Q0140	SKY1	Q03656	742 aa		3.84	□□□□□ -1.79
VAR1	Q0140	YLR281C	Q05863	155 aa		3.84	□□□□□ -1.79
VAR1	Q0140	HOS1	Q12214	470 aa		3.84	□□□□□ -1.79
VAR1	Q0140	URA3	P03962	267 aa		3.83	□□□□□ -1.8
VAR1	Q0140	RPL42A	P0CX27	106 aa	Known RBP	3.83	□□□□□ -1.8
VAR1	Q0140	RPL42B	P0CX28	106 aa	Known RBP	3.83	□□□□□ -1.8
VAR1	Q0140	NIC96	P34077	839 aa		3.83	□□□□□ -1.8
VAR1	Q0140	RKM3	P38222	552 aa		3.83	□□□□□ -1.8
VAR1	Q0140	ARO9	P38840	513 aa	Predicted RBP	3.83	□□□□□ -1.8
VAR1	Q0140	IDS2	P46958	469 aa		3.83	□□□□□ -1.8
VAR1	Q0140	ECM16	Q04217	1267 aa	Known RBP	3.83	□□□□□ -1.8
VAR1	Q0140	RSA1	Q08932	381 aa		3.83	□□□□□ -1.8
VAR1	Q0140	PRP16	P15938	1071 aa	Predicted RBP	3.82	□□□□□ -1.8
VAR1	Q0140	DAL3	P32459	195 aa		3.82	□□□□□ -1.8
VAR1	Q0140	GSH1	P32477	678 aa		3.82	□□□□□ -1.8
VAR1	Q0140	VBA2	P38358	474 aa	Known RBP	3.82	□□□□□ -1.8
VAR1	Q0140	YPL191C	Q08930	360 aa		3.82	□□□□□ -1.8
VAR1	Q0140	FAP7	Q12055	197 aa	Predicted RBP	3.82	□□□□□ -1.8
VAR1	Q0140	YCR061W	P25639	631 aa		3.81	□□□□□ -1.8
VAR1	Q0140	PRP45	P28004	379 aa	Predicted RBP	3.81	□□□□□ -1.8
VAR1	Q0140	YND1	P40009	630 aa		3.81	□□□□□ -1.8
VAR1	Q0140	UBP7	P40453	1071 aa		3.81	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms