RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SKIP12755 728 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 CCT4P50991 539 aaKnown RBP6.06□□□□□ -1.44
LINC00550-201ENST00000629293 BRICD5Q6PL45 260 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 METTL22Q9BUU2 404 aaPredicted RBP6.06□□□□□ -1.44
LINC00550-201ENST00000629293 MINPP1Q9UNW1 487 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 ACTN4O43707 911 aaKnown RBP6.05□□□□□ -1.44
LINC00550-201ENST00000629293 TAF5LO75529 589 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 HOXB7P09629 217 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 ERCC3P19447 782 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 TAGLNQ01995 201 aaKnown RBP6.05□□□□□ -1.44
LINC00550-201ENST00000629293 PTPN12Q05209 780 aaKnown RBP6.05□□□□□ -1.44
LINC00550-201ENST00000629293 TRIM28Q13263 835 aaKnown RBP6.05□□□□□ -1.44
LINC00550-201ENST00000629293 R3HDMLQ9H3Y0 253 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 SAGE1Q9NXZ1 904 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 VPS9D1Q9Y2B5 631 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 COL4A1P02462 1669 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 SCN9AQ15858 1988 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 GPR25O00155 361 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 VAMP1P23763 118 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 ZNF280AP59817 542 aaPredicted RBP6.05□□□□□ -1.44
LINC00550-201ENST00000629293 FKBP5Q13451 457 aaPredicted RBP6.05□□□□□ -1.44
LINC00550-201ENST00000629293 G2E3Q7L622 706 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 TAS1R3Q7RTX0 852 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 ARMC9Q7Z3E5 817 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 TTLL11Q8NHH1 800 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 TRIM17Q9Y577 477 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 ITGA6P23229 1130 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 TRMT2AQ8IZ69 625 aaKnown RBP6.05□□□□□ -1.44
LINC00550-201ENST00000629293 SLC10A4Q96EP9 437 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 PCDHAC2Q9Y5I4 1007 aa6.05□□□□□ -1.44
LINC00550-201ENST00000629293 IGKV5-2P06315 115 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 CALD1Q05682 793 aaKnown RBP6.04□□□□□ -1.44
LINC00550-201ENST00000629293 DLGAP5Q15398 846 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 TAF7LQ5H9L4 462 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 ANKMY2Q8IV38 441 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 CLMNQ96JQ2 1002 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 IFT57Q9NWB7 429 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 SZT2Q5T011 3432 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 DACT2Q5SW24 774 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 KSR2Q6VAB6 950 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 SIX5Q8N196 739 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 PLPP7Q8NBV4 271 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 GMLQ99445 158 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 BSDC1Q9NW68 430 aaPredicted RBP6.04□□□□□ -1.44
LINC00550-201ENST00000629293 ZNF804BA4D1E1 1349 aa6.04□□□□□ -1.44
LINC00550-201ENST00000629293 FKTNO75072 461 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 FKBP1BP68106 108 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 SWI5Q1ZZU3 235 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 LDLRAD1Q5T700 205 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 DEFB129Q9H1M3 183 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 LAMB2P55268 1798 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 PPP1R12BO60237 982 aaPredicted RBP6.03□□□□□ -1.44
LINC00550-201ENST00000629293 SREBF2Q12772 1141 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 TWISTNBQ3B726 338 aaPredicted RBP6.03□□□□□ -1.44
LINC00550-201ENST00000629293 STRIP1Q5VSL9 837 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 COA1Q9GZY4 146 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 IQSEC3Q9UPP2 1182 aaPredicted RBP6.03□□□□□ -1.44
LINC00550-201ENST00000629293 AKAP11Q9UKA4 1901 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 NEURL1BA8MQ27 555 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 F6X3S4 739 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 CHRNDQ07001 517 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 SLFN5Q08AF3 891 aa6.03□□□□□ -1.44
LINC00550-201ENST00000629293 LAMA3Q16787 3333 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 MYO1BO43795 1136 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 FRAT2O75474 233 aaPredicted RBP6.02□□□□□ -1.45
LINC00550-201ENST00000629293 PTPRNQ16849 979 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 SLC4A10Q6U841 1118 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 APOBEC3FQ8IUX4 373 aaKnown RBP6.02□□□□□ -1.45
LINC00550-201ENST00000629293 PNMA1Q8ND90 353 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 USB1Q9BQ65 265 aaKnown RBP6.02□□□□□ -1.45
LINC00550-201ENST00000629293 RECKO95980 971 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 ZNF853P0CG23 659 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 DPYDQ12882 1025 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 SPRYD7Q5W111 196 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 FBXO46Q6PJ61 603 aaPredicted RBP6.02□□□□□ -1.45
LINC00550-201ENST00000629293 LAPTM4BQ86VI4 370 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 ZNF594Q96JF6 807 aaPredicted RBP6.02□□□□□ -1.45
LINC00550-201ENST00000629293 CRBNQ96SW2 442 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 CNNM1Q9NRU3 951 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 PITPNM2Q9BZ72 1349 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 ANKRD18BA2A2Z9 1011 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 ARHGAP33O14559 1287 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 IFIT5Q13325 482 aaKnown RBP6.02□□□□□ -1.45
LINC00550-201ENST00000629293 CFAP100Q494V2 611 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 NBPF12Q5TAG4 269 aaPredicted RBP6.02□□□□□ -1.45
LINC00550-201ENST00000629293 FAM200AQ8TCP9 573 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 CD99L2Q8TCZ2 262 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 ANKRD2Q9GZV1 360 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 CD209Q9NNX6 404 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 LEMD3Q9Y2U8 911 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 GPSM3Q9Y4H4 160 aa6.02□□□□□ -1.45
LINC00550-201ENST00000629293 MYO3BQ8WXR4 1341 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 MED23Q9ULK4 1368 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 ANKRD33BA6NCL7 494 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 RASA1P20936 1047 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 CHAF1AQ13111 956 aaPredicted RBP6.01□□□□□ -1.45
LINC00550-201ENST00000629293 GCKRQ14397 625 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 PKN2Q16513 984 aaKnown RBP6.01□□□□□ -1.45
LINC00550-201ENST00000629293 DNAAF4Q8WXU2 420 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 CHMP4AQ9BY43 222 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms