RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 TAOK2Q9UL54 1235 aa18.63■□□□□ 0.57
SREBF1-222ENST00000583732 FOCADQ5VW36 1801 aa18.63■□□□□ 0.57
SREBF1-222ENST00000583732 TNPO2O14787 897 aaKnown RBP18.62■□□□□ 0.57
SREBF1-222ENST00000583732 SLAIN1Q8ND83 568 aa18.62■□□□□ 0.57
SREBF1-222ENST00000583732 AGTPBP1Q9UPW5 1226 aa18.62■□□□□ 0.57
SREBF1-222ENST00000583732 SLC45A1Q9Y2W3 748 aa18.62■□□□□ 0.57
SREBF1-222ENST00000583732 COL2A1P02458 1487 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-222ENST00000583732 H0YGN5 161 aa18.61■□□□□ 0.57
SREBF1-222ENST00000583732 TBC1D12O60347 775 aa18.61■□□□□ 0.57
SREBF1-222ENST00000583732 ELNP15502 786 aa18.61■□□□□ 0.57
SREBF1-222ENST00000583732 SPP2Q13103 211 aa18.61■□□□□ 0.57
SREBF1-222ENST00000583732 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
SREBF1-222ENST00000583732 DBNDD2Q9BQY9 259 aa18.61■□□□□ 0.57
SREBF1-222ENST00000583732 AATFQ9NY61 560 aaKnown RBP eCLIP18.61■□□□□ 0.571e-7■□□□□ 8.1
SREBF1-222ENST00000583732 COLQQ9Y215 455 aaPredicted RBP18.61■□□□□ 0.57
SREBF1-222ENST00000583732 ADCY3O60266 1144 aa18.6■□□□□ 0.57
SREBF1-222ENST00000583732 NPM3O75607 178 aaKnown RBP18.6■□□□□ 0.57
SREBF1-222ENST00000583732 FLT3LGP49771 235 aa18.6■□□□□ 0.57
SREBF1-222ENST00000583732 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
SREBF1-222ENST00000583732 TNNI3KQ59H18 835 aa18.6■□□□□ 0.57
SREBF1-222ENST00000583732 NAA16Q6N069 864 aaPredicted RBP18.6■□□□□ 0.57
SREBF1-222ENST00000583732 DPF3Q92784 378 aa18.6■□□□□ 0.57
SREBF1-222ENST00000583732 UNC93B1Q9H1C4 597 aa18.6■□□□□ 0.57
SREBF1-222ENST00000583732 PNMA3Q9UL41 463 aa18.6■□□□□ 0.57
SREBF1-222ENST00000583732 FPGT-TNNI3KV9GXZ4 949 aa18.6■□□□□ 0.57
SREBF1-222ENST00000583732 MAP4K4O95819 1239 aaPredicted RBP18.59■□□□□ 0.57
SREBF1-222ENST00000583732 GJB1P08034 283 aa18.59■□□□□ 0.57
SREBF1-222ENST00000583732 GJA8P48165 433 aa18.59■□□□□ 0.57
SREBF1-222ENST00000583732 HMGCS2P54868 508 aa18.59■□□□□ 0.57
SREBF1-222ENST00000583732 POLA2Q14181 598 aa18.59■□□□□ 0.57
SREBF1-222ENST00000583732 CCDC158Q5M9N0 1113 aa18.59■□□□□ 0.57
SREBF1-222ENST00000583732 MAPKAPK5Q8IW41 473 aa18.59■□□□□ 0.57
SREBF1-222ENST00000583732 ZNF280CQ8ND82 737 aa18.59■□□□□ 0.57
SREBF1-222ENST00000583732 NKX2-3Q8TAU0 364 aa18.59■□□□□ 0.57
SREBF1-222ENST00000583732 SURF6O75683 361 aaKnown RBP18.58■□□□□ 0.56
SREBF1-222ENST00000583732 INHAP05111 366 aa18.58■□□□□ 0.56
SREBF1-222ENST00000583732 CAP2P40123 477 aa18.58■□□□□ 0.56
SREBF1-222ENST00000583732 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.56
SREBF1-222ENST00000583732 PROCA1Q8NCQ7 364 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-222ENST00000583732 DOCK3Q8IZD9 2030 aa18.57■□□□□ 0.56
SREBF1-222ENST00000583732 BAG3O95817 575 aa18.57■□□□□ 0.56
SREBF1-222ENST00000583732 CYP2E1P05181 493 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-222ENST00000583732 ATP8B2P98198 1209 aa18.57■□□□□ 0.56
SREBF1-222ENST00000583732 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.563e-6■■■■□ 20.1
SREBF1-222ENST00000583732 ADGRA1Q86SQ6 560 aa18.57■□□□□ 0.56
SREBF1-222ENST00000583732 ITPRIPQ8IWB1 547 aa18.57■□□□□ 0.56
SREBF1-222ENST00000583732 SSH3Q8TE77 659 aa18.57■□□□□ 0.56
SREBF1-222ENST00000583732 U2AF1L4Q8WU68 220 aaKnown RBP18.57■□□□□ 0.56
SREBF1-222ENST00000583732 TGFBRAP1Q8WUH2 860 aa18.57■□□□□ 0.56
SREBF1-222ENST00000583732 GPR108Q9NPR9 543 aa18.57■□□□□ 0.56
SREBF1-222ENST00000583732 FLT1P17948 1338 aa18.56■□□□□ 0.56
SREBF1-222ENST00000583732 USP17L5A8MUK1 530 aa18.56■□□□□ 0.56
SREBF1-222ENST00000583732 ZAP70P43403 619 aa18.56■□□□□ 0.56
SREBF1-222ENST00000583732 FXR1P51114 621 aaKnown RBP eCLIP18.56■□□□□ 0.56
SREBF1-222ENST00000583732 FAM110CQ1W6H9 321 aa18.56■□□□□ 0.56
SREBF1-222ENST00000583732 COA7Q96BR5 231 aa18.56■□□□□ 0.56
SREBF1-222ENST00000583732 TRIM34Q9BYJ4 488 aa18.56■□□□□ 0.56
SREBF1-222ENST00000583732 AS3MTQ9HBK9 375 aa18.56■□□□□ 0.56
SREBF1-222ENST00000583732 TLR7Q9NYK1 1049 aaKnown RBP18.56■□□□□ 0.56
SREBF1-222ENST00000583732 HERC5Q9UII4 1024 aaKnown RBP18.56■□□□□ 0.56
SREBF1-222ENST00000583732 MYH1P12882 1939 aa18.55■□□□□ 0.56
SREBF1-222ENST00000583732 FARP2O94887 1054 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-222ENST00000583732 GDF11O95390 407 aa18.55■□□□□ 0.56
SREBF1-222ENST00000583732 PABPC4Q13310 644 aaKnown RBP eCLIP18.55■□□□□ 0.56
SREBF1-222ENST00000583732 SHROOM1Q2M3G4 852 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-222ENST00000583732 CHRDL2Q6WN34 429 aa18.55■□□□□ 0.56
SREBF1-222ENST00000583732 CRACR2BQ8N4Y2 399 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-222ENST00000583732 CCDC8Q9H0W5 538 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-222ENST00000583732 PIH1D3Q9NQM4 214 aaKnown RBP18.55■□□□□ 0.56
SREBF1-222ENST00000583732 PI4KBQ9UBF8 816 aa18.55■□□□□ 0.56
SREBF1-222ENST00000583732 SAP30BPQ9UHR5 308 aaKnown RBP18.55■□□□□ 0.56
SREBF1-222ENST00000583732 RLBP1P12271 317 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 PLCG2P16885 1265 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 DYNLL1P63167 89 aaKnown RBP18.54■□□□□ 0.56
SREBF1-222ENST00000583732 JAG1P78504 1218 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 IRF5Q13568 498 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 MTMR2Q13614 643 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 PXYLP1Q8TE99 480 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 DEFB118Q96PH6 123 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 HTATIP2Q9BUP3 242 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 TBC1D2Q9BYX2 928 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 ASCC2Q9H1I8 757 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-222ENST00000583732 DHX36Q9H2U1 1008 aaKnown RBP18.54■□□□□ 0.56
SREBF1-222ENST00000583732 DNAJC18Q9H819 358 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 DBNLQ9UJU6 430 aaKnown RBP18.54■□□□□ 0.56
SREBF1-222ENST00000583732 PALD1Q9ULE6 856 aa18.54■□□□□ 0.56
SREBF1-222ENST00000583732 SGPL1O95470 568 aa18.53■□□□□ 0.56
SREBF1-222ENST00000583732 UBE2Q1Q7Z7E8 422 aa18.53■□□□□ 0.56
SREBF1-222ENST00000583732 NDUFB9Q9Y6M9 179 aa18.53■□□□□ 0.56
SREBF1-222ENST00000583732 PLXNB2O15031 1838 aa18.53■□□□□ 0.56
SREBF1-222ENST00000583732 PEX10O60683 326 aa18.52■□□□□ 0.56
SREBF1-222ENST00000583732 TFRCP02786 760 aaKnown RBP18.52■□□□□ 0.56
SREBF1-222ENST00000583732 CYP7A1P22680 504 aa18.52■□□□□ 0.56
SREBF1-222ENST00000583732 GCLCP48506 637 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-222ENST00000583732 PPP4CP60510 307 aa18.52■□□□□ 0.56
SREBF1-222ENST00000583732 IRX3P78415 501 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-222ENST00000583732 SH3D19Q5HYK7 790 aa18.52■□□□□ 0.56
SREBF1-222ENST00000583732 TMOD4Q9NZQ9 345 aa18.52■□□□□ 0.56
SREBF1-222ENST00000583732 IDH1O75874 414 aaKnown RBP18.51■□□□□ 0.55
SREBF1-222ENST00000583732 ASNSP08243 561 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms