RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PCDHGC4Q9Y5F7 938 aa3.3□□□□□ -1.88
TRAV1-1-201ENST00000542354 PTCH2Q9Y6C5 1203 aa3.3□□□□□ -1.88
TRAV1-1-201ENST00000542354 NDUFB9Q9Y6M9 179 aa3.3□□□□□ -1.88
TRAV1-1-201ENST00000542354 ZNF462Q96JM2 2506 aa3.3□□□□□ -1.88
TRAV1-1-201ENST00000542354 PPLO60437 1756 aa3.3□□□□□ -1.88
TRAV1-1-201ENST00000542354 CPSF1Q10570 1443 aaKnown RBP3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 ANKRD50Q9ULJ7 1429 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 TCF20Q9UGU0 1960 aaKnown RBP3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 FAM186AA6NE01 2351 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 C1QTNF9BB2RNN3 333 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 SERPINB2P05120 415 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 SYN1P17600 705 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 INHBEP58166 350 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 SNRPNP63162 240 aaKnown RBP3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 FKBP1BP68106 108 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 SP3Q02447 781 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 LAMC2Q13753 1193 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 TLR1Q15399 786 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 AKNAD1Q5T1N1 836 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 DGLUCYQ7Z3D6 616 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 KRT26Q7Z3Y9 468 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 BANK1Q8NDB2 785 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 TRPM4Q8TD43 1214 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 XAGE2Q96GT9 111 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 BTBD6Q96KE9 485 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 NIFKQ9BYG3 293 aaKnown RBP3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 TTYH1Q9H313 450 aaPredicted RBP3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 DCHS1Q96JQ0 3298 aa3.29□□□□□ -1.88
TRAV1-1-201ENST00000542354 DOT1LQ8TEK3 1739 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 FAM205AQ6ZU69 1335 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 ADGRF5Q8IZF2 1346 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 SHISA8B8ZZ34 492 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 ATXN7O15265 892 aaPredicted RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 FBXO45P0C2W1 286 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 ALADP13716 330 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 MSX1P28360 303 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 DGKGP49619 791 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 SMAD3P84022 425 aaKnown RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 PRKG1Q13976 671 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 MTFR1Q15390 333 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 SLFNL1Q499Z3 407 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 PRPF40BQ6NWY9 871 aaKnown RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 CHSY3Q70JA7 882 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 NECAB2Q7Z6G3 386 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 PPARGC1BQ86YN6 1023 aaKnown RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 PROCA1Q8NCQ7 364 aaPredicted RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 ZKSCAN4Q969J2 545 aaPredicted RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 MFSD14AQ96MC6 490 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 PRRX2Q99811 253 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 BRIP1Q9BX63 1249 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 RNF208Q9H0X6 261 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 OSBPL3Q9H4L5 887 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 NEUROD4Q9HD90 331 aa3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 HMX1Q9NP08 348 aaPredicted RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 CXXC1Q9P0U4 656 aaPredicted RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 SRP68Q9UHB9 627 aaKnown RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 GPC6Q9Y625 555 aaPredicted RBP3.28□□□□□ -1.88
TRAV1-1-201ENST00000542354 TEP1Q99973 2627 aaKnown RBP3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 USP24Q9UPU5 2620 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 USP42Q9H9J4 1324 aaKnown RBP3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 NEURL1BA8MQ27 555 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 H7C1D1 291 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 SGPL1O95470 568 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 TFRCP02786 760 aaKnown RBP3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 CCL5P13501 91 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 COL8A1P27658 744 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 PHKA2P46019 1235 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 HIRAP54198 1017 aaPredicted RBP3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 C4orf17Q53FE4 359 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 ARSJQ5FYB0 599 aaPredicted RBP3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 OTUD7BQ6GQQ9 843 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 STYK1Q6J9G0 422 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 DLK2Q6UY11 383 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 LINC00114Q6XXX2 140 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 CD163Q86VB7 1156 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 U2AF1L4Q8WU68 220 aaKnown RBP3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 PIGBQ92521 554 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 DCPSQ96C86 337 aaKnown RBP3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 ABHD17AQ96GS6 310 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 CHAMP1Q96JM3 812 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 CDK19Q9BWU1 502 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 IRF2BPLQ9H1B7 796 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 RUBCNLQ9H714 662 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 ZFP64Q9NPA5 681 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 ZDHHC3Q9NYG2 299 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 DOLKQ9UPQ8 538 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 MON2Q7Z3U7 1717 aa3.27□□□□□ -1.89
TRAV1-1-201ENST00000542354 NUP155O75694 1391 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 COL15A1P39059 1388 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 CDH23Q9H251 3354 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 RGPD5Q99666 1765 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 KRT38O76015 456 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 ITGB2P05107 769 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 PLA2G4AP47712 749 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 PRMT2P55345 433 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 UBXN2AP68543 259 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 NRG1Q02297 640 aaPredicted RBP3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 TRIM28Q13263 835 aaKnown RBP3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 TCIRG1Q13488 830 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 PDE3AQ14432 1141 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms