RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	NAP1L2	Q9ULW6	460 aa	Predicted RBP	7.34	□□□□□ -1.23
PABPC4-222	ENST00000527718	ANGEL1	Q9UNK9	670 aa	Known RBP	7.34	□□□□□ -1.23
PABPC4-222	ENST00000527718	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.34	□□□□□ -1.23
PABPC4-222	ENST00000527718	SLC4A4	Q9Y6R1	1079 aa		7.34	□□□□□ -1.23
PABPC4-222	ENST00000527718	COL24A1	Q17RW2	1714 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	C6orf229	H3BNL8	230 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	POLRMT	O00411	1230 aa	Known RBP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	TRAK2	O60296	914 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	PFKFB2	O60825	505 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	UFL1	O94874	794 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	MBD4	O95243	580 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	BRD1	O95696	1058 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	ZSCAN22	P10073	491 aa	Predicted RBP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	LIFR	P42702	1097 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	AKAP17A	Q02040	695 aa	Known RBP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	SAFB	Q15424	915 aa	Known RBP eCLIP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	SLC15A2	Q16348	729 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	ZNF827	Q17R98	1081 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	KLHL40	Q2TBA0	621 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	AKNAD1	Q5T1N1	836 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	TRAF7	Q6Q0C0	670 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	DPP8	Q6V1X1	898 aa	Predicted RBP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	NOL8	Q76FK4	1167 aa	Known RBP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	IFNL3	Q8IZI9	196 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	MPND	Q8N594	471 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	GTF3C6	Q969F1	213 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	CCDC34	Q96HJ3	373 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	LRCH3	Q96II8	777 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	PKNOX2	Q96KN3	472 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	ZNF396	Q96N95	335 aa	Predicted RBP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	VPS33B	Q9H267	617 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	PIH1D3	Q9NQM4	214 aa	Known RBP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	TOMM22	Q9NS69	142 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	HPS5	Q9UPZ3	1129 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	ATP6V0A2	Q9Y487	856 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	DDX49	Q9Y6V7	483 aa	Known RBP	7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	TUBGCP6	Q96RT7	1819 aa		7.33	□□□□□ -1.24
PABPC4-222	ENST00000527718	MYH14	Q7Z406	1995 aa	Known RBP	7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718		M0R2C6	588 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	PRC1	O43663	620 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	BAG4	O95429	457 aa	Known RBP	7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	POLD1	P28340	1107 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	GJB2	P29033	226 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	USP5	P45974	858 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	GYG1	P46976	350 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	EVC	P57679	992 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	GNL2	Q13823	731 aa	Known RBP	7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	TJAP1	Q5JTD0	557 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	CCDC83	Q8IWF9	413 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	FAM177A1	Q8N128	213 aa	Predicted RBP	7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	STAG1	Q8WVM7	1258 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	BRF1	Q92994	677 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	AGXT2	Q9BYV1	514 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	PUS7L	Q9H0K6	701 aa	Known RBP	7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	BRMS1	Q9HCU9	246 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	RBM28	Q9NW13	759 aa	Known RBP	7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	ANAPC4	Q9UJX5	808 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	SLC12A7	Q9Y666	1083 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	QSER1	Q2KHR3	1735 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	ARAP2	Q8WZ64	1704 aa		7.32	□□□□□ -1.24
PABPC4-222	ENST00000527718	CASZ1	Q86V15	1759 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	TCRBV5S4A2T	A0A5A2	114 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	VPS37C	A5D8V6	355 aa	Predicted RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	IFIT3	O14879	490 aa	Known RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	ZBTB43	O43298	467 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	CD2BP2	O95400	341 aa	Known RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	MMP10	P09238	476 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	IL1R1	P14778	569 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	KIF5B	P33176	963 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	GNAQ	P50148	359 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	METAP2	P50579	478 aa	Known RBP eCLIP	7.31	□□□□□ -1.24	2e-7	■■■□□ 17.2
PABPC4-222	ENST00000527718	FKBP1A	P62942	108 aa	Known RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	EXOSC10	Q01780	885 aa	Known RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	CHAF1A	Q13111	956 aa	Predicted RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	SCARF1	Q14162	830 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	WTAP	Q15007	396 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	ADCK5	Q3MIX3	580 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	TMEM67	Q5HYA8	995 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	MCTP1	Q6DN14	999 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	CCDC129	Q6ZRS4	1044 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	UBR3	Q6ZT12	1888 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	PODN	Q7Z5L7	613 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	CATIP	Q7Z7H3	387 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	DDX60	Q8IY21	1712 aa	Known RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	RTKN2	Q8IZC4	609 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	JMY	Q8N9B5	988 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	TDRD7	Q8NHU6	1098 aa	Known RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	SEC62	Q99442	399 aa	Known RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	WWC3	Q9ULE0	1092 aa		7.31	□□□□□ -1.24
PABPC4-222	ENST00000527718	MYO3B	Q8WXR4	1341 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	GOLGA6L3	A6NEY3	463 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	GOLGA8B	A8MQT2	603 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	NRG2	O14511	850 aa	Predicted RBP	7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	F13A1	P00488	732 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	SRGN	P10124	158 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	SYT1	P21579	422 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	PPP4C	P60510	307 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	UBE2H	P62256	183 aa		7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms