RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 FNDC3BQ53EP0 1204 aaKnown RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 PPP4R4Q6NUP7 873 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 LLGL2Q6P1M3 1020 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 CNNM4Q6P4Q7 775 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 UNC5AQ6ZN44 842 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 DDX46Q7L014 1031 aaKnown RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 STRA8Q7Z7C7 330 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 C11orf96Q7Z7L8 435 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 SULF2Q8IWU5 870 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 CHPFQ8IZ52 775 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 MYO1HQ8N1T3 1032 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 SAMD3Q8N6K7 520 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 GPR161Q8N6U8 529 aaKnown RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 TTC8Q8TAM2 541 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 RIN3Q8TB24 985 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 GRIN3AQ8TCU5 1115 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 EXOC2Q96KP1 924 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 CLUHP3Q96NS8 147 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 RUSC1Q9BVN2 902 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 TARS2Q9BW92 718 aaKnown RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 EPN3Q9H201 632 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 CBX8Q9HC52 389 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 GPAMQ9HCL2 828 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 CHST12Q9NRB3 414 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 ZIM2Q9NZV7 527 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 SLC12A7Q9Y666 1083 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 LTBP3Q9NS15 1303 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 PHLDB1Q86UU1 1377 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 TTLL8A6PVC2 850 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 EFSO43281 561 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 AKAP10O43572 662 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 SH3BP5O60239 455 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 ACRP10323 421 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 ARAFP10398 606 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 CPEP16870 476 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 ARNTP27540 789 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 CCNFP41002 786 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 NEK2P51955 445 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 IRX6P78412 446 aaPredicted RBP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 PTSQ03393 145 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 ZNF252P-AS1Q0IIN9 211 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 SAFB2Q14151 953 aaKnown RBP eCLIP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 HLTFQ14527 1009 aaKnown RBP eCLIP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 DHX8Q14562 1220 aaKnown RBP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 BRD3Q15059 726 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 ZYXQ15942 572 aaKnown RBP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 HSP90AB4PQ58FF6 505 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 FAM209AQ5JX71 171 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 KIAA1211LQ6NV74 962 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 LRRTM3Q86VH5 581 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 TAB3Q8N5C8 712 aaPredicted RBP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 TMEM40Q8WWA1 233 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 IL17RAQ96F46 866 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 NSUN5Q96P11 429 aaKnown RBP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 DHRS4Q9BTZ2 278 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 EMILIN2Q9BXX0 1053 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 MAF1Q9H063 256 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 RASSF4Q9H2L5 321 aa3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 CLEC4MQ9H2X3 399 aaPredicted RBP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 BCCIPQ9P287 314 aaKnown RBP eCLIP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 MRPS23Q9Y3D9 190 aaKnown RBP3.35□□□□□ -1.87
SCARNA3-201ENST00000517097 TRBV23-1A0A0A0MS06 115 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 FIGNL2A6NMB9 653 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 HMGB1P1B2RPK0 211 aaPredicted RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 J3QW42 95 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 ATXN7O15265 892 aaPredicted RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 HTR3BO95264 441 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 MAP3K6O95382 1288 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 B3GALT4O96024 378 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 CENPBP07199 599 aaPredicted RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 FAM157BP0CG42 384 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 NME1P15531 152 aaKnown RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 SELPP16109 830 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 SDSP20132 328 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 CDK8P49336 464 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 PCDH1Q08174 1060 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 MTMR1Q13613 665 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 VPS72Q15906 364 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 ZNF423Q2M1K9 1284 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 EFHC2Q5JST6 749 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 SPTY2D1Q68D10 685 aaPredicted RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 INTS3Q68E01 1043 aaKnown RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 SCARA3Q6AZY7 606 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 OVOS1Q6IE37 1185 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 ADAMTSL4Q6UY14 1074 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 MPRIPQ6WCQ1 1025 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 LHFPL2Q6ZUX7 228 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 DHX32Q7L7V1 743 aaKnown RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 NECAB2Q7Z6G3 386 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 WDR66Q8TBY9 1149 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 LEO1Q8WVC0 666 aaPredicted RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 BSNDQ8WZ55 320 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 KLHL6Q8WZ60 621 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 DDX1Q92499 740 aaKnown RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 HOOK2Q96ED9 719 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 MTMR8Q96EF0 704 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 SMAD5Q99717 465 aaKnown RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 CDC6Q99741 560 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 MRPL4Q9BYD3 311 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms