RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 DISP1Q96F81 1524 aa8.84□□□□□ -0.99
NPHP3-211ENST00000515289 PRR36Q9H6K5 1346 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 PLD2O14939 933 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 GRIN3BO60391 1043 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 RASGRP1O95267 797 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 F11P03951 625 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 ARNTP27540 789 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 GUCY2FP51841 1108 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 NRLP54845 237 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 FOXC1Q12948 553 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 LAMC2Q13753 1193 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 C4orf46Q504U0 113 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 UBR7Q8N806 425 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 ATL2Q8NHH9 583 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 NSUN5Q96P11 429 aaKnown RBP8.83□□□□□ -1
NPHP3-211ENST00000515289 TRERF1Q96PN7 1200 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 PBX4Q9BYU1 374 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 MUC3BQ9H195 1237 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 ANTXR1Q9H6X2 564 aa8.83□□□□□ -1
NPHP3-211ENST00000515289 PHAXQ9H814 394 aaKnown RBP8.83□□□□□ -1
NPHP3-211ENST00000515289 TTC24A2A3L6 582 aaPredicted RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 SUSD5O60279 629 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 CPEP16870 476 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 OS9Q13438 667 aaPredicted RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 LBRQ14739 615 aaKnown RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 EFHC2Q5JST6 749 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 FIGNL1Q6PIW4 674 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 DHX32Q7L7V1 743 aaKnown RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 ZNF598Q86UK7 904 aaKnown RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 RIN3Q8TB24 985 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 GRIN3AQ8TCU5 1115 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 KISS1RQ969F8 398 aaPredicted RBP8.82□□□□□ -1
NPHP3-211ENST00000515289 DYRK1BQ9Y463 629 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 KIAA0556O60303 1618 aa8.82□□□□□ -1
NPHP3-211ENST00000515289 DNAJC25-GNG10A0A024R161 153 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 SHTN1A0MZ66 631 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 SCGB1D2O95969 90 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 ZNF252P-AS1Q0IIN9 211 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 INTS3Q68E01 1043 aaKnown RBP8.81□□□□□ -1
NPHP3-211ENST00000515289 STK35Q8TDR2 534 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 BSNDQ8WZ55 320 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 ASPSCR1Q9BZE9 553 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 CBX8Q9HC52 389 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 INTS7Q9NVH2 962 aaKnown RBP8.81□□□□□ -1
NPHP3-211ENST00000515289 PHLDB1Q86UU1 1377 aa8.81□□□□□ -1
NPHP3-211ENST00000515289 ATXN7O15265 892 aaPredicted RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 EYA4O95677 639 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 BMP2P12643 396 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 ZEB1P37275 1124 aaPredicted RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 PTPN11Q06124 597 aaPredicted RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 PCDH1Q08174 1060 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 RALBP1Q15311 655 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 LRRC41Q15345 812 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 AXDND1Q5T1B0 1012 aaPredicted RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 UNC5AQ6ZN44 842 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 NECAB2Q7Z6G3 386 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 SAMD3Q8N6K7 520 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 SLC39A13Q96H72 371 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 TARS2Q9BW92 718 aaKnown RBP8.8□□□□□ -1
NPHP3-211ENST00000515289 RASSF4Q9H2L5 321 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 ARNT2Q9HBZ2 717 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 CCNB3Q8WWL7 1395 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 LRRIQ1Q96JM4 1722 aa8.8□□□□□ -1
NPHP3-211ENST00000515289 HTR3BO95264 441 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 RAPGEF3O95398 923 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 MYL1P05976 194 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 SMPD1P17405 629 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 NEK2P51955 445 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 MLECQ14165 292 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 MYO1HQ8N1T3 1032 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 UBE2Q2Q8WVN8 375 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 EVI5LQ96CN4 794 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 EXOC2Q96KP1 924 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 DHRS4Q9BTZ2 278 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 GMIPQ9P107 970 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 PCDHGC4Q9Y5F7 938 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 LTBP3Q9NS15 1303 aa8.79□□□□□ -1
NPHP3-211ENST00000515289 KATNA1O75449 491 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 ACRP10323 421 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 ATF3P18847 181 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 L1CAMP32004 1257 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 CCNFP41002 786 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 GPLD1P80108 840 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 SPEM2Q0P670 501 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 ZYXQ15942 572 aaKnown RBP8.78□□□□□ -1
NPHP3-211ENST00000515289 ZNF423Q2M1K9 1284 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 FOXB2Q5VYV0 432 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 LRRTM3Q86VH5 581 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 CYP4X1Q8N118 509 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 MRPL4Q9BYD3 311 aaKnown RBP8.78□□□□□ -1
NPHP3-211ENST00000515289 HCSTQ9UBK5 93 aa8.78□□□□□ -1
NPHP3-211ENST00000515289 MRPS23Q9Y3D9 190 aaKnown RBP8.78□□□□□ -1
NPHP3-211ENST00000515289 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1
NPHP3-211ENST00000515289 HECW1Q76N89 1606 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 ARHGEF11O15085 1522 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 MAGI3Q5TCQ9 1506 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 LOC102724428A0A0B4J2F2 783 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 HMGB1P1B2RPK0 211 aaPredicted RBP8.77□□□□□ -1.01
NPHP3-211ENST00000515289 AGRPO00253 132 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms