RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 CCNJLQ8IV13 435 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 BEND7Q8N7W2 519 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 KIF1BPQ96EK5 621 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 GPATCH3Q96I76 525 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 CEP89Q96ST8 783 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 RASSF4Q9H2L5 321 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 CXorf56Q9H5V9 222 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 ZFYVE1Q9HBF4 777 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 STK26Q9P289 416 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 CCDC39Q9UFE4 941 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 NSFL1CQ9UNZ2 370 aaKnown RBP4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 KCNH4Q9UQ05 1017 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 MRVI1Q9Y6F6 885 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 RUSC2Q8N2Y8 1516 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 CCDC18Q5T9S5 1454 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 UACAQ9BZF9 1416 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 PLEKHG2Q9H7P9 1386 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 ANKRD18BA2A2Z9 1011 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 SHISA8B8ZZ34 492 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 ENPP3O14638 875 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 EFSO43281 561 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 FBXO24O75426 580 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 KIF4AO95239 1232 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 CELA3AP09093 270 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 FAM157BP0CG42 384 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 HOXD8P13378 290 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 ITPKAP23677 461 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 MAP2K3P46734 347 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 SNRPNP63162 240 aaKnown RBP4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 LMNB2Q03252 620 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 FAM160A1Q05DH4 1040 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 SFSWAPQ12872 951 aaKnown RBP4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 CAMK2GQ13555 558 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 KLHL40Q2TBA0 621 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 MAP9Q49MG5 647 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 HSP90AB4PQ58FF6 505 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 COL13A1Q5TAT6 717 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 PCNX4Q63HM2 1172 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 TPTE2Q6XPS3 522 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 KRT25Q7Z3Z0 450 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 SMC5Q8IY18 1101 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 PGBD3Q8N328 593 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 TMTC2Q8N394 836 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 SDR16C5Q8N3Y7 309 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 SNX21Q969T3 373 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 RNPC3Q96LT9 517 aaKnown RBP4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 OSMRQ99650 979 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 SLX1AQ9BQ83 275 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 ZKSCAN3Q9BRR0 538 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 SLKQ9H2G2 1235 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 ZNF446Q9NWS9 450 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 UBP1Q9NZI7 540 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 ZFATQ9P243 1243 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 POLKQ9UBT6 870 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 PRKAG3Q9UGI9 489 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 RSPH14Q9UHP6 348 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 TLR6Q9Y2C9 796 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 GCC2Q8IWJ2 1684 aa4.31□□□□□ -1.72
HMGB3P8-201ENST00000449709 PTPRGP23470 1445 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 BRD4O60885 1362 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 KDRP35968 1356 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 MSTNO14793 375 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 RARAP10276 462 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 HSPA5P11021 654 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 ACPPP15309 386 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 LIG1P18858 919 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 U2AF2P26368 475 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 CALRP27797 417 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 SOX18P35713 384 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 CRKP46108 304 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 GRIA4P48058 902 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 TDO2P48775 406 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 HNRNPH2P55795 449 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 RPS26P62854 115 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 KIAA2012Q0VF49 1180 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 RASA3Q14644 834 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 LBRQ14739 615 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 RAB3GAP1Q15042 981 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 PTPROQ16827 1216 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 EFHC2Q5JST6 749 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 SNAP47Q5SQN1 464 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 AGMOQ6ZNB7 445 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 LRP10Q7Z4F1 713 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 CCDC91Q7Z6B0 441 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 SLITRK4Q8IW52 837 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 GOLM1Q8NBJ4 401 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 GALNT6Q8NCL4 622 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 KIF18AQ8NI77 898 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 HNRNPLLQ8WVV9 542 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 NKD1Q969G9 470 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 ZBTB9Q96C00 473 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 ABHD17AQ96GS6 310 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 SHDQ96IW2 340 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 NECAB3Q96P71 396 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 SRPK1Q96SB4 655 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 SPOCK3Q9BQ16 436 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 BRINP2Q9C0B6 783 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 CEP44Q9C0F1 390 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms