RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 PRR36Q9H6K5 1346 aa9.47□□□□□ -0.89
HMGB1P32-201ENST00000425971 PCF11O94913 1555 aaKnown RBP9.46□□□□□ -0.89
HMGB1P32-201ENST00000425971 DLGAP3O95886 979 aa9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 LIG1P18858 919 aa9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 CD68P34810 354 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 HNRNPUQ00839 825 aaKnown RBP eCLIP9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 PDE3AQ14432 1141 aa9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 HP1BP3Q5SSJ5 553 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 ZSCAN1Q8NBB4 408 aa9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 OR6P1Q8NGX9 317 aa9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 PCDHGC5Q9Y5F6 944 aa9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 TACC3Q9Y6A5 838 aa9.46□□□□□ -0.9
HMGB1P32-201ENST00000425971 GRIN3BO60391 1043 aa9.45□□□□□ -0.9
HMGB1P32-201ENST00000425971 RAB33AQ14088 237 aa9.45□□□□□ -0.9
HMGB1P32-201ENST00000425971 TNNI3KQ59H18 835 aa9.45□□□□□ -0.9
HMGB1P32-201ENST00000425971 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
HMGB1P32-201ENST00000425971 HNRNPLLQ8WVV9 542 aaKnown RBP9.45□□□□□ -0.9
HMGB1P32-201ENST00000425971 WDR89Q96FK6 387 aaPredicted RBP9.45□□□□□ -0.9
HMGB1P32-201ENST00000425971 WDR18Q9BV38 432 aa9.45□□□□□ -0.9
HMGB1P32-201ENST00000425971 ZSWIM4Q9H7M6 989 aa9.45□□□□□ -0.9
HMGB1P32-201ENST00000425971 DLL1O00548 723 aa9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 SMAD7O15105 426 aaKnown RBP9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 LSRQ86X29 649 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 FBXO11Q86XK2 927 aa9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 FAM177A1Q8N128 213 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 UBASH3BQ8TF42 649 aa9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 MKL1Q969V6 931 aa9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 TRIM11Q96F44 468 aa9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 STK17AQ9UEE5 414 aa9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 SYNGAP1Q96PV0 1343 aa9.44□□□□□ -0.9
HMGB1P32-201ENST00000425971 ABCA5Q8WWZ7 1642 aa9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 A0A0A0MRY4 1105 aa9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 MEIS3P2A8K0S8 358 aa9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 SMARCA5O60264 1052 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 ZC3H12AQ5D1E8 599 aaKnown RBP9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 TRAPPC3LQ5T215 181 aa9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 CYFIP1Q7L576 1253 aa9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 HDXQ7Z353 690 aa9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 CRBNQ96SW2 442 aa9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 SIRPGQ9P1W8 387 aa9.43□□□□□ -0.9
HMGB1P32-201ENST00000425971 ADAMTS12P58397 1594 aa9.42□□□□□ -0.9
HMGB1P32-201ENST00000425971 AOC2O75106 756 aa9.42□□□□□ -0.9
HMGB1P32-201ENST00000425971 HTR3BO95264 441 aa9.42□□□□□ -0.9
HMGB1P32-201ENST00000425971 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
HMGB1P32-201ENST00000425971 BMS1Q14692 1282 aaKnown RBP9.42□□□□□ -0.9
HMGB1P32-201ENST00000425971 FBXW10Q5XX13 1052 aa9.42□□□□□ -0.9
HMGB1P32-201ENST00000425971 CORINQ9Y5Q5 1042 aa9.42□□□□□ -0.9
HMGB1P32-201ENST00000425971 PTPRMP28827 1452 aa9.41□□□□□ -0.9
HMGB1P32-201ENST00000425971 RING1Q06587 406 aa9.41□□□□□ -0.9
HMGB1P32-201ENST00000425971 LINC00114Q6XXX2 140 aa9.41□□□□□ -0.9
HMGB1P32-201ENST00000425971 NEDD1Q8NHV4 660 aa9.41□□□□□ -0.9
HMGB1P32-201ENST00000425971 ELMO3Q96BJ8 720 aa9.41□□□□□ -0.9
HMGB1P32-201ENST00000425971 TRIM55Q9BYV6 548 aa9.41□□□□□ -0.9
HMGB1P32-201ENST00000425971 KIF21BO75037 1637 aa9.41□□□□□ -0.9
HMGB1P32-201ENST00000425971 DCDC2CA8MYV0 355 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 ARHGEF15O94989 841 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 CASP7P55210 303 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 RAC1P63000 192 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 SVOPQ8N4V2 548 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 TMPRSS13Q9BYE2 586 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 ANTXR1Q9H6X2 564 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 RRAGCQ9HB90 399 aa9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 CDK11AQ9UQ88 783 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P32-201ENST00000425971 GLI2P10070 1586 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 TMPRSS2O15393 492 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 WISP1O95388 367 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 ERVK-24P63145 666 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 SNRPNP63162 240 aaKnown RBP9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 LRRFIP1Q32MZ4 808 aaKnown RBP9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 TMEM201Q5SNT2 666 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 ZNF746Q6NUN9 644 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 C19orf47Q8N9M1 422 aaKnown RBP9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 TMEM40Q8WWA1 233 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 ENAMQ9NRM1 1142 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 ACTR10Q9NZ32 417 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 REV1Q9UBZ9 1251 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 R3HCC1Q9Y3T6 440 aaKnown RBP9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 CUX1P39880 1505 aa9.39□□□□□ -0.91
HMGB1P32-201ENST00000425971 FAM181BA6NEQ2 426 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 SLFN14P0C7P3 912 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 HSPA2P54652 639 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 RASA3Q14644 834 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 DUOXA2Q1HG44 320 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 KIAA1211Q6ZU35 1233 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 C12orf40Q86WS4 652 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 CELF2-AS1Q8N7Q2 184 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 HIF3AQ9Y2N7 669 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
HMGB1P32-201ENST00000425971 PRAMEF27A3QJZ7 478 aa9.37□□□□□ -0.91
HMGB1P32-201ENST00000425971 MEGF11A6BM72 1044 aa9.37□□□□□ -0.91
HMGB1P32-201ENST00000425971 DNAJA2O60884 412 aa9.37□□□□□ -0.91
HMGB1P32-201ENST00000425971 PLCG1P19174 1290 aa9.37□□□□□ -0.91
HMGB1P32-201ENST00000425971 ID3Q02535 119 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms