RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ZMYND10O75800 440 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 CDC27P30260 824 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 RWDD2BP57060 319 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 SKOR1P84550 965 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 PLCB4Q15147 1175 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 RASGRP2Q7LDG7 609 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 SELENOOQ9BVL4 669 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-201ENST00000373019 N4BP2Q86UW6 1770 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-201ENST00000373019 NRXN3Q9Y4C0 1643 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 NAP1L1P55209 391 aaKnown RBP10.82□□□□□ -0.68
SF3A3-201ENST00000373019 PDE4BQ07343 736 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 FLIIQ13045 1269 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 KRT28Q7Z3Y7 464 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 PARP9Q8IXQ6 854 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 CENPHQ9H3R5 247 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 IRAK4Q9NWZ3 460 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 A0A0D9SFI3 127 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 BMP6P22004 513 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 SLC8A3P57103 927 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 Q6ZUG5 572 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 BRINP3Q76B58 766 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
SF3A3-201ENST00000373019 FUKQ8N0W3 1084 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 CCDC148Q8NFR7 591 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 NAPGQ99747 312 aaPredicted RBP10.81□□□□□ -0.68
SF3A3-201ENST00000373019 CABP1Q9NZU7 370 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 PPP1R12BO60237 982 aaPredicted RBP10.81□□□□□ -0.68
SF3A3-201ENST00000373019 PPFIA3O75145 1194 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 RPS6KA3P51812 740 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 GUCY1B3Q02153 619 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 PDCLQ13371 301 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 SF3B2Q13435 895 aaKnown RBP10.81□□□□□ -0.68
SF3A3-201ENST00000373019 NAA25Q14CX7 972 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 SNCBQ16143 134 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 CYB5D1Q6P9G0 228 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 SPDL1Q96EA4 605 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 FAM210AQ96ND0 272 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 TPX2Q9ULW0 747 aaKnown RBP10.81□□□□□ -0.68
SF3A3-201ENST00000373019 MYO6Q9UM54 1294 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 JCADQ9P266 1359 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 DLC1Q96QB1 1528 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 NWD1Q149M9 1564 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 GOLGA6BA6NDN3 693 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 RPSAP08865 295 aaKnown RBP10.81□□□□□ -0.68
SF3A3-201ENST00000373019 KCNB1Q14721 858 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 E2F5Q15329 346 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 TBC1D25Q3MII6 688 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 RCSD1Q6JBY9 416 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 ZBTB10Q96DT7 871 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 C8orf37Q96NL8 207 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 CRACR2AQ9BSW2 395 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 SALL1Q9NSC2 1324 aa10.81□□□□□ -0.68
SF3A3-201ENST00000373019 MYO1BO43795 1136 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 IPO7O95373 1038 aaKnown RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 UBTFL1P0CB47 393 aaPredicted RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 PFKFB1P16118 471 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 ZNF18P17022 549 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 SPRED3Q2MJR0 410 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 TTMPQ5BVD1 217 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 NAA35Q5VZE5 725 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 C6orf89Q6UWU4 347 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 FOXP4Q8IVH2 680 aaPredicted RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 LMBR1Q8WVP7 490 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 PANX2Q96RD6 677 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 MROH7-TTC4A0A0A0MT08 1334 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 SNUPNO95149 360 aaKnown RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 PECAM1P16284 738 aaPredicted RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 ACCSLQ4AC99 568 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 CCNI2Q6ZMN8 369 aaPredicted RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 ZNF589Q86UQ0 364 aaPredicted RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 EVI5LQ96CN4 794 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 LTV1Q96GA3 475 aaPredicted RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 LLPHQ9BRT6 129 aaKnown RBP10.8□□□□□ -0.68
SF3A3-201ENST00000373019 ITSN1Q15811 1721 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 PTPDC1A2A3K4 754 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 ZEB2O60315 1214 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 PDE6BP35913 854 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 PEX19P40855 299 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 SLC5A9Q2M3M2 681 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 HSP90AB2PQ58FF8 381 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 MMS19Q96T76 1030 aa10.8□□□□□ -0.68
SF3A3-201ENST00000373019 ZC3H6P61129 1189 aaKnown RBP10.79□□□□□ -0.68
SF3A3-201ENST00000373019 PNOCQ13519 176 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 OR8K1Q8NGG5 319 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 CEMIPQ8WUJ3 1361 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 ARL8AQ96BM9 186 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 LRRC2Q9BYS8 371 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 MED23Q9ULK4 1368 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 TARSL2A2RTX5 802 aaKnown RBP10.79□□□□□ -0.68
SF3A3-201ENST00000373019 EZRP15311 586 aaKnown RBP10.79□□□□□ -0.68
SF3A3-201ENST00000373019 TRAF1Q13077 416 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 NR1I3Q14994 352 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 ARMC3Q5W041 872 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 NUCKS1Q9H1E3 243 aaKnown RBP10.79□□□□□ -0.68
SF3A3-201ENST00000373019 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 CPSF2Q9P2I0 782 aaKnown RBP10.79□□□□□ -0.68
SF3A3-201ENST00000373019 RAB27AP51159 221 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 TRAPPC11Q7Z392 1133 aa10.79□□□□□ -0.68
SF3A3-201ENST00000373019 ACRBPQ8NEB7 543 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms