RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 DDX20Q9UHI6 824 aaKnown RBP18.39■□□□□ 0.53
MBD1-204ENST00000347968 PCDHA5Q9Y5H7 936 aa18.39■□□□□ 0.53
MBD1-204ENST00000347968 COL15A1P39059 1388 aa18.39■□□□□ 0.53
MBD1-204ENST00000347968 GOLGA6BA6NDN3 693 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 AARSP49588 968 aaKnown RBP eCLIP18.38■□□□□ 0.53
MBD1-204ENST00000347968 PREPLQ4J6C6 727 aaPredicted RBP18.38■□□□□ 0.53
MBD1-204ENST00000347968 TICAM2Q86XR7 235 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 SELENOOQ9BVL4 669 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
MBD1-204ENST00000347968 PROSER2Q86WR7 435 aaPredicted RBP18.38■□□□□ 0.53
MBD1-204ENST00000347968 JMYQ8N9B5 988 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 NBPF3Q9H094 633 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 NALCNQ8IZF0 1738 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 KIF28PB7ZC32 967 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 GRIPAP1Q4V328 841 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 GRAMD1CQ8IYS0 662 aa18.38■□□□□ 0.53
MBD1-204ENST00000347968 A0A1W2PQ27 194 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 A0A1W2PQ64 194 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 A0A1W2PQD8 194 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 CDC25AP30304 524 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 ARL8AQ96BM9 186 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 MYO6Q9UM54 1294 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 GUCA1BQ9UMX6 200 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 AKR1B15C9JRZ8 316 aaPredicted RBP18.37■□□□□ 0.53
MBD1-204ENST00000347968 AP1G2O75843 785 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 GCKP35557 465 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 STX17P56962 302 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 KLHL10Q6JEL2 608 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 KIF9Q9HAQ2 790 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 USP31Q70CQ4 1352 aa18.37■□□□□ 0.53
MBD1-204ENST00000347968 ZNF142P52746 1687 aaPredicted RBP18.37■□□□□ 0.53
MBD1-204ENST00000347968 PI4KAP2A4QPH2 592 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 FDPSP14324 419 aaKnown RBP18.36■□□□□ 0.53
MBD1-204ENST00000347968 PPFIA1Q13136 1202 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 HDGFL1Q5TGJ6 251 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 PI4KAP1Q8N8J0 262 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 CHD2O14647 1828 aaKnown RBP18.36■□□□□ 0.53
MBD1-204ENST00000347968 SEC24CP53992 1094 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 IFT88Q13099 833 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 SND1Q7KZF4 910 aaKnown RBP eCLIP18.36■□□□□ 0.53
MBD1-204ENST00000347968 USHBP1Q8N6Y0 703 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 C19orf44Q9H6X5 657 aa18.36■□□□□ 0.53
MBD1-204ENST00000347968 METTL16Q86W50 562 aaKnown RBP18.36■□□□□ 0.53
MBD1-204ENST00000347968 MSL3Q8N5Y2 521 aaKnown RBP18.36■□□□□ 0.53
MBD1-204ENST00000347968 ENO4A6NNW6 628 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 MEFVO15553 781 aaPredicted RBP18.35■□□□□ 0.53
MBD1-204ENST00000347968 SF3A3Q12874 501 aaKnown RBP eCLIP18.35■□□□□ 0.533e-8■■■■■ 54.4
MBD1-204ENST00000347968 CCDC40Q4G0X9 1142 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 TBC1D22AQ8WUA7 517 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 STAG1Q8WVM7 1258 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 SH3BP1Q9Y3L3 701 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 USP14P54578 494 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 PIP4K2BP78356 416 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 APBA1Q02410 837 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 SF3B2Q13435 895 aaKnown RBP18.35■□□□□ 0.53
MBD1-204ENST00000347968 SNX1Q13596 522 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 DDX17Q92841 729 aaKnown RBP18.35■□□□□ 0.53
MBD1-204ENST00000347968 AIFM3Q96NN9 605 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 CARMIL3Q8ND23 1372 aa18.35■□□□□ 0.53
MBD1-204ENST00000347968 CASP14P31944 242 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 GUCY1A3Q02108 690 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
MBD1-204ENST00000347968 MYSM1Q5VVJ2 828 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 KCNG4Q8TDN1 519 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 EYA1Q99502 592 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 OPLAHO14841 1288 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 ZNF185O15231 689 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 MYO1BO43795 1136 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 DDR1Q08345 913 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 CCDC13Q8IYE1 715 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 PARD3BQ8TEW8 1205 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 ZBTB10Q96DT7 871 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 SLC40A1Q9NP59 571 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 FMN2Q9NZ56 1722 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 EIF4E1BA6NMX2 242 aaKnown RBP18.34■□□□□ 0.53
MBD1-204ENST00000347968 TBC1D31Q96DN5 1066 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 C8orf76Q96K31 380 aa18.34■□□□□ 0.53
MBD1-204ENST00000347968 ANKARQ7Z5J8 1434 aa18.33■□□□□ 0.53
MBD1-204ENST00000347968 BACH1O14867 736 aa18.33■□□□□ 0.53
MBD1-204ENST00000347968 WHAMMP3Q1A5X7 153 aa18.33■□□□□ 0.53
MBD1-204ENST00000347968 SPRED3Q2MJR0 410 aa18.33■□□□□ 0.53
MBD1-204ENST00000347968 WDR93Q6P2C0 686 aa18.33■□□□□ 0.53
MBD1-204ENST00000347968 SHC4Q6S5L8 630 aa18.33■□□□□ 0.53
MBD1-204ENST00000347968 THOC1Q96FV9 657 aaKnown RBP18.33■□□□□ 0.53
MBD1-204ENST00000347968 XAGE2Q96GT9 111 aa18.33■□□□□ 0.53
MBD1-204ENST00000347968 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.53
MBD1-204ENST00000347968 MATR3P43243 847 aaKnown RBP eCLIP18.33■□□□□ 0.52
MBD1-204ENST00000347968 NBPF20Q3BBV1 942 aa18.33■□□□□ 0.52
MBD1-204ENST00000347968 ANO1Q5XXA6 986 aa18.33■□□□□ 0.52
MBD1-204ENST00000347968 FAM228AQ86W67 206 aa18.33■□□□□ 0.52
MBD1-204ENST00000347968 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.52
MBD1-204ENST00000347968 GBP2P32456 591 aaPredicted RBP18.32■□□□□ 0.52
MBD1-204ENST00000347968 C2orf54Q08AI8 447 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
MBD1-204ENST00000347968 HMG20BQ9P0W2 317 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms