RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Qrich1Q3UA37 777 aa18.49■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 SkilQ60665 675 aa18.49■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Pde3bQ61409 1100 aa18.49■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Aldh8a1Q8BH00 487 aa18.49■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Slc45a1Q8BIV7 751 aa18.49■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Rbm28Q8CGC6 750 aaKnown RBP18.49■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Add2Q9QYB8 725 aa18.49■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Rlbp1Q9Z275 317 aa18.49■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Lamb1P02469 1786 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 FlgP11088 336 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Hmox1P14901 289 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Gnat2P50149 354 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 VrtnQ3SYK4 740 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Tbc1d7Q9D0K0 293 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Styxl1Q9DAR2 321 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Stk3Q9JI10 497 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Arih1Q9Z1K5 555 aa18.48■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Gm15262A0A140LIQ5 728 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Mms22lB1AUR6 1238 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Ldlrad1D3YYZ1 218 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Lamp1P11438 406 aaKnown RBP18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Tex2Q6ZPJ0 1128 aaKnown RBP18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Ube2oQ6ZPJ3 1288 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Scfd2Q8BTY8 684 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Trex1Q91XB0 314 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Fsip1Q9D3V5 435 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Cd2apQ9JLQ0 637 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Myh14Q6URW6 2000 aa18.47■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 B020004C17RikJ3QP07 232 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Ly6dP35459 127 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 LifrP42703 1092 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 SelpQ01102 768 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Zfp341Q6PGC9 846 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Itm2cQ91VK4 269 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Tomm22Q9CPQ3 142 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Tjap1Q9DCD5 539 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Ngly1Q9JI78 651 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Usp31E9Q6Y8 1344 aa18.46■□□□□ 0.55
Hmgb1-208ENSMUST00000139443 Col2a1P28481 1487 aa18.46■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Pcdhb9E9Q5G2 828 aa18.45■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Eps15P42567 897 aa18.45■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Mybl2P48972 704 aa18.45■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Scnn1aQ61180 699 aa18.45■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Ppp1r11Q8K1L5 131 aa18.45■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 SynrgQ5SV85 1306 aa18.45■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Cyp2d9P11714 504 aa18.44■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Mcm2P97310 904 aa18.44■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Znf667Q2TL60 609 aa18.44■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Hs1bp3Q3TC93 395 aa18.44■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Olfm4Q3UZZ4 505 aa18.44■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Mov10l1Q99MV5 1187 aa18.44■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Pus3Q9JI38 481 aa18.44■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Ift74Q8BKE9 600 aa18.43■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Inpp5bQ8K337 993 aa18.43■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Adam1bQ8R534 806 aa18.43■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Elp3Q9CZX0 547 aa18.43■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Usp14Q9JMA1 493 aaKnown RBP18.43■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Ccdc88aQ5SNZ0 1873 aa18.43■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Krt28A6BLY7 462 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Bnip3O55003 187 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 ThbdP15306 577 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Csrnp3P59055 597 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Kcnh8P59111 1102 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Fam83hQ148V8 1209 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Pdlim7Q3TJD7 457 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Ppp1r26Q6A025 1163 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Rbm43Q99J64 343 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Erc1Q99MI1 1120 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Igsf9bE9PZ19 1328 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Rad50P70388 1312 aa18.42■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Zkscan2G3X952 960 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Abl1P00520 1123 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Gjb1P28230 283 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Hoxd10P28359 340 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Prr7Q3V0I2 269 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Ctr9Q62018 1173 aaKnown RBP18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 HelbQ6NVF4 1074 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Dync1li2Q6PDL0 492 aaKnown RBP18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Lmbrd2Q8C561 694 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 MlphQ91V27 590 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Lysmd1Q9D0E3 226 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Dynll2Q9D0M5 89 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Znf287Q9EQB9 759 aa18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Tfip11Q9ERA6 838 aaKnown RBP18.41■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Ltbp2O08999 1813 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 A0A1W2P6Q8 802 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Gm9048A0A1W2P7H4 802 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 A0A1W2P7Z8 802 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Gm9046A0A1W2P855 802 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Ano3A2AHL1 981 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Dennd3A2RT67 1274 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 NapbP28663 298 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Irf5P56477 497 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 GclcP97494 637 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Brip1Q5SXJ3 1174 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Ttll4Q80UG8 1193 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Cetn4Q8K4K1 168 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Cdk8Q8R3L8 464 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Vta1Q9CR26 309 aa18.4■□□□□ 0.54
Hmgb1-208ENSMUST00000139443 Sept2P42208 361 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms