RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 Il1rapl2Q9ERS6 686 aa16.62■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Frmpd4A2AFR3 1320 aa16.62■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Gm43951A0A0N4SUT6 962 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Rbbp8nlA2ABX0 614 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Ces1aE9PYP1 563 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Phldb3E9QAF4 648 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Kcnh8P59111 1102 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Ncf1Q09014 390 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Ppp1r26Q6A025 1163 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Fndc3bQ6NWW9 1207 aaKnown RBP16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Olfm5Q8BU90 496 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Trex1Q91XB0 314 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Rdm1Q9CQK3 281 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Acot3Q9QYR7 432 aa16.61■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Kiaa0100Q5SYL3 2234 aa16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Gm36210A0A1B0GS00 229 aa16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Fam178bQ24JP3 464 aa16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Aoc2Q812C9 757 aa16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Slc45a1Q8BIV7 751 aa16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Cluap1Q8R3P7 413 aa16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Apbb1ipQ8R5A3 670 aa16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Gpr37l1Q99JG2 481 aa16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Chmp4bQ9D8B3 224 aaKnown RBP16.6■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Sema3fO88632 785 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Il7P10168 154 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Lamp1P11438 406 aaKnown RBP16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Gjb1P28230 283 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Aak1Q3UHJ0 959 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Ces1dQ8VCT4 565 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Gpsm2Q8VDU0 679 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Dynll2Q9D0M5 89 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Disp2Q8CIP5 1345 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Med23Q80YQ2 1367 aa16.59■□□□□ 0.25
Ccdc58-201ENSMUST00000099937 Cntnap5bQ0V8T8 1292 aa16.58■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Elp3Q9CZX0 547 aa16.58■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Ubxn11Q9D572 484 aa16.58■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Rai14Q9EP71 979 aaKnown RBP16.58■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 SynrgQ5SV85 1306 aa16.58■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Col2a1P28481 1487 aa16.58■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Myh7Q91Z83 1935 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Pus7B7ZNL8 666 aaKnown RBP16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Fgfr2P21803 821 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Psmc4P54775 418 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 SelpQ01102 768 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Qrich1Q3UA37 777 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 MyrflQ3UN70 904 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Prpf38aQ4FK66 312 aaKnown RBP16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Sv2cQ69ZS6 727 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 HelbQ6NVF4 1074 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Dync1li2Q6PDL0 492 aaKnown RBP16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Dlk2Q8K1E3 382 aa16.57■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 B020004C17RikJ3QP07 232 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 LtkP08923 888 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 NefhP19246 1090 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Wdr70Q3TWF6 657 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Slc16a10Q3U9N9 512 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Spata5Q3UMC0 893 aaKnown RBP16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Foxd1Q61345 456 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Trim32Q8CH72 655 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Rnf208Q8K0W3 265 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Bap1Q99PU7 728 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Ngly1Q9JI78 651 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Bcar3Q9QZK2 820 aa16.56■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Usp31E9Q6Y8 1344 aa16.55■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Upf2A2AT37 1269 aaKnown RBP16.55■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 PrkczQ02956 592 aa16.55■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Srrm1Q52KI8 946 aaKnown RBP16.55■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Exoc8Q6PGF7 716 aa16.55■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Trim56Q80VI1 734 aaKnown RBP16.55■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Add2Q9QYB8 725 aa16.55■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Palm3A2TJV2 734 aa16.54■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Gjd2O54851 321 aa16.54■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Fxr1Q61584 677 aaKnown RBP16.54■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Ctr9Q62018 1173 aaKnown RBP16.54■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Nop58Q6DFW4 536 aaKnown RBP16.54■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Zfp341Q6PGC9 846 aa16.54■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Sgpl1Q8R0X7 568 aa16.54■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 HibadhQ99L13 335 aaKnown RBP16.54■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Trim5E9PV98 497 aa16.53■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Pcdhb9E9Q5G2 828 aa16.53■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 ArxO35085 564 aa16.53■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Sept2P42208 361 aaKnown RBP16.53■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 VrtnQ3SYK4 740 aa16.53■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Sapcd2Q9D818 391 aa16.53■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Znhit2Q9QY66 399 aa16.53■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Lama3Q61789 3330 aa16.53■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Fam186bD3Z420 943 aa16.52■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Morf4l1P60762 362 aa16.52■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 CalcaP70160 136 aa16.52■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 YdjcQ14BV6 310 aa16.52■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Snx17Q8BVL3 470 aa16.52■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 HnrnpuQ8VEK3 800 aaKnown RBP16.52■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Ccdc39Q9D5Y1 937 aa16.52■□□□□ 0.24
Ccdc58-201ENSMUST00000099937 Tnni2P13412 182 aa16.51■□□□□ 0.23
Ccdc58-201ENSMUST00000099937 Ppm1gQ61074 542 aa16.51■□□□□ 0.23
Ccdc58-201ENSMUST00000099937 Dcaf15Q6PFH3 600 aa16.51■□□□□ 0.23
Ccdc58-201ENSMUST00000099937 Scfd2Q8BTY8 684 aa16.51■□□□□ 0.23
Ccdc58-201ENSMUST00000099937 Ndufv1Q91YT0 464 aa16.51■□□□□ 0.23
Ccdc58-201ENSMUST00000099937 Armcx1Q9CX83 456 aa16.51■□□□□ 0.23
Ccdc58-201ENSMUST00000099937 Tbc1d7Q9D0K0 293 aa16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms