Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Gm25239-201ENSMUST00000174915 86 ntBASIC45.19■■■■■ 4.82
Psmc4P54775 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.03■■■■■ 4.32
Psmc4P54775 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.4■■■■■ 4.22
Psmc4P54775 Gm24109-201ENSMUST00000175489 103 ntBASIC39.42■■■■□ 3.9
Psmc4P54775 Gm15042-201ENSMUST00000120212 883 ntBASIC38.98■■■■□ 3.83
Psmc4P54775 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.18■■■■□ 3.7
Psmc4P54775 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Psmc4P54775 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
Psmc4P54775 Gm15045-201ENSMUST00000117359 883 ntBASIC38.01■■■■□ 3.68
Psmc4P54775 Gm23366-201ENSMUST00000175022 89 ntBASIC37.67■■■■□ 3.62
Psmc4P54775 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Psmc4P54775 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.96■■■■□ 3.51
Psmc4P54775 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.62■■■■□ 3.45
Psmc4P54775 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.56■■■■□ 3.44
Psmc4P54775 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Psmc4P54775 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Psmc4P54775 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Psmc4P54775 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.13■■■■□ 3.37
Psmc4P54775 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Psmc4P54775 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Psmc4P54775 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.89■■■■□ 3.34
Psmc4P54775 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Psmc4P54775 Gm25238-201ENSMUST00000174914 89 ntBASIC35.84■■■■□ 3.33
Psmc4P54775 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Psmc4P54775 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
Psmc4P54775 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
Psmc4P54775 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Psmc4P54775 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Psmc4P54775 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Psmc4P54775 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.85■■■■□ 3.17
Psmc4P54775 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
Psmc4P54775 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.17
Psmc4P54775 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
Psmc4P54775 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.62■■■■□ 3.13
Psmc4P54775 Gm25262-201ENSMUST00000174934 133 ntBASIC34.61■■■■□ 3.13
Psmc4P54775 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.61■■■■□ 3.13
Psmc4P54775 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Psmc4P54775 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Psmc4P54775 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Psmc4P54775 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.28■■■■□ 3.08
Psmc4P54775 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.27■■■■□ 3.08
Psmc4P54775 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.09■■■■□ 3.05
Psmc4P54775 Gm27325-201ENSMUST00000175467 74 ntBASIC34.07■■■■□ 3.04
Psmc4P54775 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.02■■■■□ 3.04
Psmc4P54775 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Psmc4P54775 Gm26115-201ENSMUST00000175605 87 ntBASIC33.96■■■■□ 3.03
Psmc4P54775 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.91■■■■□ 3.02
Psmc4P54775 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.9■■■■□ 3.02
Psmc4P54775 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Psmc4P54775 Rab21-202ENSMUST00000218831 843 ntBASIC33.79■■■■□ 3
Psmc4P54775 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.77■■■■□ 3
Psmc4P54775 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
Psmc4P54775 Gm8109-201ENSMUST00000194076 746 ntBASIC33.7■■■□□ 2.99
Psmc4P54775 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Psmc4P54775 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Psmc4P54775 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Psmc4P54775 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Psmc4P54775 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Psmc4P54775 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Psmc4P54775 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Psmc4P54775 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.44■■■□□ 2.94
Psmc4P54775 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
Psmc4P54775 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.33■■■□□ 2.93
Psmc4P54775 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.24■■■□□ 2.91
Psmc4P54775 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.17■■■□□ 2.9
Psmc4P54775 Psd-208ENSMUST00000224556 2034 ntBASIC33.16■■■□□ 2.9
Psmc4P54775 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Psmc4P54775 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Psmc4P54775 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Psmc4P54775 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Psmc4P54775 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.87■■■□□ 2.85
Psmc4P54775 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Psmc4P54775 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.85■■■□□ 2.85
Psmc4P54775 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Psmc4P54775 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Psmc4P54775 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.8■■■□□ 2.84
Psmc4P54775 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Psmc4P54775 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Psmc4P54775 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.69■■■□□ 2.82
Psmc4P54775 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Psmc4P54775 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.65■■■□□ 2.82
Psmc4P54775 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.58■■■□□ 2.81
Psmc4P54775 Gm24804-201ENSMUST00000174982 85 ntBASIC32.55■■■□□ 2.8
Psmc4P54775 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
Psmc4P54775 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.43■■■□□ 2.78
Psmc4P54775 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.42■■■□□ 2.78
Psmc4P54775 Gm27322-201ENSMUST00000184007 104 ntBASIC32.39■■■□□ 2.78
Psmc4P54775 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Psmc4P54775 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
Psmc4P54775 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Psmc4P54775 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.3■■■□□ 2.76
Psmc4P54775 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Psmc4P54775 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.24■■■□□ 2.75
Psmc4P54775 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Psmc4P54775 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.23■■■□□ 2.75
Psmc4P54775 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
Psmc4P54775 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Psmc4P54775 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Psmc4P54775 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Psmc4P54775 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms