RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Trbv14A0A140T8L9 115 aa13.45□□□□□ -0.26
Scn1b-203ENSMUST00000211945 P01738 130 aa13.45□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Smim9Q3V0X1 137 aa13.45□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Dand5Q76LW6 185 aa13.45□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Tmem263Q9DAM7 115 aa13.45□□□□□ -0.26
Scn1b-203ENSMUST00000211945 PrkdcP97313 4128 aa13.45□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Tex26Q0VB26 296 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Rhox4eQ504P9 205 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Trav7-2Q5R1I3 112 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Slc17a2Q5SZA1 478 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Mrps26Q80ZS3 200 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Glrx2Q923X4 156 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Mrpl20Q9CQL4 149 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Fam25cQ8CF02 89 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Anapc16Q9CPV2 110 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Mrpl18Q9CQL5 180 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Gtsf1lQ9CWD0 151 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Tagln2Q9WVA4 199 aaKnown RBP13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Npc2Q9Z0J0 149 aa13.44□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Trbv13-1A0A0B4J1P8 112 aa13.43□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Atp5iQ06185 71 aaKnown RBP13.43□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Tmed6Q9CQG0 239 aa13.43□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Gm10490F6VBM2 120 aa13.42□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Gm21874J3QNZ6 232 aa13.42□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Sub1P11031 127 aaKnown RBP13.42□□□□□ -0.26
Scn1b-203ENSMUST00000211945 MdfiP70331 251 aa13.42□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Cotl1Q9CQI6 142 aa13.42□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Trav13d-1A0A075B606 110 aa13.41□□□□□ -0.26
Scn1b-203ENSMUST00000211945 P01745 121 aa13.41□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Ctdsp1P58466 261 aa13.41□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Immp2lQ8BPT6 175 aa13.41□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Chchd7Q8K2Q5 85 aa13.41□□□□□ -0.26
Scn1b-203ENSMUST00000211945 RhebQ921J2 184 aa13.41□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Trav14n-3A0A075B645 120 aa13.4□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Trav7-4A0A075B6C1 113 aa13.4□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Trav7d-4Q5R1H9 113 aa13.4□□□□□ -0.26
Scn1b-203ENSMUST00000211945 SnapinQ9Z266 136 aa13.4□□□□□ -0.26
Scn1b-203ENSMUST00000211945 Olfr1118A0A0J9YUE7 307 aa13.39□□□□□ -0.27
Scn1b-203ENSMUST00000211945 AsipQ03288 131 aa13.39□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Foxc1Q61572 553 aa13.39□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Olfr1431Q8VF59 312 aa13.39□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Trav9n-2A0A0G2JDP3 113 aa13.39□□□□□ -0.27
Scn1b-203ENSMUST00000211945 7420426K07RikQ3UX66 186 aa13.39□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Spag11Q8K4N2 71 aa13.39□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Nop10Q9CQS2 64 aa13.39□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Twist1P26687 206 aa13.38□□□□□ -0.27
Scn1b-203ENSMUST00000211945 CtsgP28293 261 aa13.38□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Tmem241Q3UME2 297 aa13.38□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Trav7d-3Q5R1I1 112 aa13.38□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Olfr1419Q7TQS2 343 aa13.38□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Cphx2Q8BX39 182 aa13.38□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Ube2l6Q9QZU9 153 aa13.38□□□□□ -0.27
Scn1b-203ENSMUST00000211945 PigyP0C1P0 71 aa13.37□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Olfr1537P34983 314 aa13.37□□□□□ -0.27
Scn1b-203ENSMUST00000211945 C1qcQ02105 246 aa13.37□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Klk15Q8CGR4 254 aa13.37□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Trav7n-4A0A075B620 113 aa13.36□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Ms4a12A0A087WSB9 263 aa13.36□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Gm17359A0A0G2JEB7 487 aa13.36□□□□□ -0.27
Scn1b-203ENSMUST00000211945 H2al2bA9Z055 111 aa13.36□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Nkx6-2D3Z4R4 277 aa13.36□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Timm8bP62077 83 aaKnown RBP13.36□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Leap2Q91V13 76 aa13.36□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Igkv4-74A0A0B4J1I3 119 aa13.35□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Olfr1191-ps1A0A1L1STD5 311 aa13.35□□□□□ -0.27
Scn1b-203ENSMUST00000211945 B230217C12RikE9Q3Z1 139 aa13.35□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Gm10203F6QJ09 66 aa13.35□□□□□ -0.27
Scn1b-203ENSMUST00000211945 NpbQ8K4P1 119 aa13.35□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Csmd3Q80T79 3707 aa13.35□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Ighv6-7A0A0A6YWU3 119 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Gm20499D3Z4G5 72 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 TshbP12656 138 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Klk9Q32M27 251 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 CnfnQ6PCW6 111 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Mrpl36Q99N90 102 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Zmat5Q9CQR5 170 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Huwe1Q7TMY8 4377 aaKnown RBP13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Trim63Q38HM4 350 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Olfr313Q5NC55 308 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Gm10334Q792Y8 246 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Gm14214V9GX35 225 aa13.34□□□□□ -0.27
Scn1b-203ENSMUST00000211945 Krtap27-1E9PX37 202 aa13.33□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Foxh1O88621 401 aa13.33□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Csn3P06796 181 aa13.33□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Cacng7P62956 275 aa13.33□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Khdc1aQ3UWR2 166 aa13.33□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Trbv16A0A0B4J1H3 115 aa13.32□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Rhox4gQ2MDF7 205 aa13.32□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Sslp1Q3UN54 99 aa13.32□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Olfr322Q5NCC8 327 aa13.32□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Ighv1-66A0A075B5X5 117 aa13.31□□□□□ -0.28
Scn1b-203ENSMUST00000211945 S100a4P07091 101 aa13.31□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Igfbp1P47876 272 aa13.31□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Foxi1Q922I5 372 aa13.31□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Ndufa3Q9CQ91 84 aa13.31□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Trav14d-1A0A075B6B1 121 aa13.3□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Pex7P97865 318 aa13.3□□□□□ -0.28
Scn1b-203ENSMUST00000211945 SnrpcQ62241 159 aa13.3□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Gkn1Q9CR36 201 aa13.3□□□□□ -0.28
Scn1b-203ENSMUST00000211945 Psmg3Q9CZH3 122 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms