RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Psmg4P0C7N9 123 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ca1P13634 261 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 Tex26Q0VB26 296 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 MycbQ6P8Z1 170 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gpr82Q8BZR0 328 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 TctaQ8VEA7 122 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 Mrpl36Q99N90 102 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 Lamtor2Q9JHS3 125 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 Tctex1d2Q9CQ66 144 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 Rnf114Q9ET26 229 aa11.72□□□□□ -0.53
Vcan-201ENSMUST00000109543 Gm17359A0A0G2JEB7 487 aa11.71□□□□□ -0.53
Vcan-201ENSMUST00000109543 P0C913 63 aa11.71□□□□□ -0.53
Vcan-201ENSMUST00000109543 Klhdc1Q80YG3 406 aa11.71□□□□□ -0.53
Vcan-201ENSMUST00000109543 Cyyr1Q8VIH7 165 aa11.71□□□□□ -0.53
Vcan-201ENSMUST00000109543 Ighv1-50A0A075B5W1 117 aa11.71□□□□□ -0.54
Vcan-201ENSMUST00000109543 Trdv2-1A0A0G2JGB9 116 aa11.71□□□□□ -0.54
Vcan-201ENSMUST00000109543 Smim15Q3UTD9 74 aa11.71□□□□□ -0.54
Vcan-201ENSMUST00000109543 OtorQ9JIE3 128 aa11.71□□□□□ -0.54
Vcan-201ENSMUST00000109543 TroQ6DIC6 2087 aa11.7□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ighv1-16A0A075B5U1 98 aa11.7□□□□□ -0.54
Vcan-201ENSMUST00000109543 P01747 120 aa11.7□□□□□ -0.54
Vcan-201ENSMUST00000109543 P06330 118 aa11.7□□□□□ -0.54
Vcan-201ENSMUST00000109543 Slc16a4Q8R0M8 500 aa11.7□□□□□ -0.54
Vcan-201ENSMUST00000109543 Prrc2aQ7TSC1 2158 aaKnown RBP11.7□□□□□ -0.54
Vcan-201ENSMUST00000109543 Krtap26-1Q9D7N2 215 aa11.7□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ighv1-75A0A075B5Y2 117 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Vsig4F6TUL9 280 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Gng4P50153 75 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 PlnP61014 52 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Cdx4Q07424 282 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ighv14-1A0A075B5R4 117 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ighv3-3A0A0A6YWL2 116 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ighv1-12A0A0A6YXJ9 117 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Gm765B2RVL9 189 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 AponG3X9D6 251 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Tmem14cQ9CQN6 114 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 Wfdc2Q9DAU7 174 aa11.69□□□□□ -0.54
Vcan-201ENSMUST00000109543 FlncQ8VHX6 2726 aaKnown RBP11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 LhbO09108 141 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Wfdc15aQ8BH89 80 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Hspb8Q9JK92 196 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ccl24Q9JKC0 119 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Snai3Q9QY31 287 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 EsdQ9R0P3 282 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ighv1-52A0A0A6YXC3 117 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 P01812 117 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Olfr322Q5NCC8 327 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Olfr498Q8VEW2 330 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Odf3Q920N1 254 aa11.68□□□□□ -0.54
Vcan-201ENSMUST00000109543 Trbv17A0A140T8P8 114 aa11.67□□□□□ -0.54
Vcan-201ENSMUST00000109543 Gm5819E9PZ96 154 aa11.67□□□□□ -0.54
Vcan-201ENSMUST00000109543 Tcl1b4P56844 120 aa11.67□□□□□ -0.54
Vcan-201ENSMUST00000109543 Defa22Q8C1N8 93 aa11.67□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ammecr1lQ8JZZ6 310 aa11.67□□□□□ -0.54
Vcan-201ENSMUST00000109543 Arhgap32Q811P8 2089 aa11.67□□□□□ -0.54
Vcan-201ENSMUST00000109543 CrxO54751 299 aa11.66□□□□□ -0.54
Vcan-201ENSMUST00000109543 Gm16223Q8CBM3 117 aa11.66□□□□□ -0.54
Vcan-201ENSMUST00000109543 Klk7Q91VE3 249 aa11.66□□□□□ -0.54
Vcan-201ENSMUST00000109543 Hectd1Q69ZR2 2618 aaKnown RBP11.66□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ighv6-7A0A0A6YWU3 119 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 P06334 169 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 MdfiP70331 251 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 Hnrnpa3Q8BG05 379 aaKnown RBP11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 Tspo2Q9CRZ8 162 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 Dusp14Q9JLY7 198 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 Sorl1O88307 2215 aaKnown RBP11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 P06328 117 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 Defa-rs1P17533 116 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 Fam222aQ6PGH4 453 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ndufb4Q9CQC7 129 aa11.65□□□□□ -0.54
Vcan-201ENSMUST00000109543 Ceacam15A0A0B4J1L0 234 aa11.64□□□□□ -0.55
Vcan-201ENSMUST00000109543 Mrps12O35680 139 aa11.64□□□□□ -0.55
Vcan-201ENSMUST00000109543 Igkv4-74A0A0B4J1I3 119 aa11.64□□□□□ -0.55
Vcan-201ENSMUST00000109543 Trbv14A0A140T8L9 115 aa11.64□□□□□ -0.55
Vcan-201ENSMUST00000109543 Esp3J3QN49 87 aa11.64□□□□□ -0.55
Vcan-201ENSMUST00000109543 Gm10604Q3V0X7 143 aa11.64□□□□□ -0.55
Vcan-201ENSMUST00000109543 Ndufa4Q62425 82 aaKnown RBP11.64□□□□□ -0.55
Vcan-201ENSMUST00000109543 Emp2O88662 172 aa11.63□□□□□ -0.55
Vcan-201ENSMUST00000109543 Prr3Q811B5 190 aaKnown RBP11.63□□□□□ -0.55
Vcan-201ENSMUST00000109543 Srsf12Q8C8K3 266 aa11.63□□□□□ -0.55
Vcan-201ENSMUST00000109543 Tmem238lA0A1B0GS74 79 aa11.63□□□□□ -0.55
Vcan-201ENSMUST00000109543 Ndufc2Q9CQ54 120 aa11.63□□□□□ -0.55
Vcan-201ENSMUST00000109543 Ighv2-7A0A075B5Q8 116 aa11.62□□□□□ -0.55
Vcan-201ENSMUST00000109543 Sumo2P61957 95 aaKnown RBP11.62□□□□□ -0.55
Vcan-201ENSMUST00000109543 Tmem88bQ3TYP4 173 aa11.62□□□□□ -0.55
Vcan-201ENSMUST00000109543 Defa30E9QPZ2 93 aa11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 Snrpd3P62320 126 aaKnown RBP11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 Slc35d2Q762D5 326 aa11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 Olfr1367Q8VFG2 316 aa11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 Znhit3Q9CQK1 151 aa11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 Dynlrb2Q9DAJ5 96 aa11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 NpsP0C0P8 89 aa11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 Wfdc21Q8BTE6 63 aa11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 Slc25a20Q9Z2Z6 301 aaKnown RBP11.61□□□□□ -0.55
Vcan-201ENSMUST00000109543 Ighv2-3A0A075B696 115 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Igkv4-62A0A0G2JDW9 117 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Gm45521A0A1B0GRK0 198 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 P01794 123 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 TcraP01849 138 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Defa6P50704 93 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 58.1 ms