RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Foxs1Q61574 329 aa9.7□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ndufb4Q9CQC7 129 aa9.7□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ighv1-31A0A0A6YWK5 117 aa9.69□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Rpl35aO55142 110 aa9.69□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Cxcl13O55038 109 aa9.69□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Gm19410A0A140LJC7 2098 aa9.69□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 P04219 140 aa9.69□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Vsig4F6TUL9 280 aa9.69□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ndufa11Q9D8B4 141 aa9.69□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Lyrm9Q3UN90 78 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 PemtQ61907 199 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Atp6v0e1Q9CQD8 81 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Srsf2Q62093 221 aaKnown RBP9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Lmo1Q924W9 156 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Gm7075D3Z497 112 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 CrygcQ61597 174 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 FAM186AQ9D9R9 1790 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ang3P97802 145 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Cxcl14Q9WUQ5 99 aa9.68□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Brca1P48754 1812 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ptprz1B9EKR1 2312 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Shank3Q4ACU6 1730 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ighv1-55A0A075B5W6 117 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Spag11Q8K4N2 71 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 P01802 115 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ltbp1Q8CG19 1712 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ank3G5E8K5 1961 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 AngP21570 145 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Atp5g3P56384 141 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Cfc1P97766 202 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Atp5g1Q9CR84 136 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Pip4p2Q9CZX7 257 aa9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Cnot1Q6ZQ08 2375 aaKnown RBP9.67□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Gm19345G3UYD9 124 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Cd59aO55186 123 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 7420426K07RikQ3UX66 186 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Igkv12-89A0A0G2JGW8 112 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 P01837 106 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ccl3P10855 92 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ccl24Q9JKC0 119 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Colca2F8VPY8 239 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Gm42674D3YUT9 64 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ccl19O70460 108 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 AmelxP63277 210 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Leap2Q91V13 76 aa9.66□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Gm20481G3UXK4 153 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Q9DAQ5 155 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 MylkQ6PDN3 1941 aaKnown RBP9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 P01756 117 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 P01757 117 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Cr2P19070 1025 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Gata3P23772 443 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 P06330 118 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ly6c1P0CW02 131 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Edn1P22387 202 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Csrp1P97315 193 aaKnown RBP9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Cmc4Q61908 68 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 BC048562Q80ZQ7 204 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ifitm1Q9D103 106 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Dscaml1Q4VA61 2053 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Ep300B2RWS6 2412 aa9.65□□□□□ -0.86
Pcdhac1-201ENSMUST00000007584 Lypd8Q9D7S0 255 aa9.65□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 PhipQ8VDD9 1821 aaKnown RBP9.65□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Malrd1A2AJX4 2123 aa9.65□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Col4a3Q9QZS0 1669 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Atad5Q4QY64 1826 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Zfp36l1P23950 338 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Defb33Q30KN3 62 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Ramp1Q9WTJ5 148 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Rp1P56716 2095 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Tmem254aP0DN89 123 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Tmem254bP0DN90 123 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Tmem254cP0DN91 123 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Rnf166Q3U9F6 237 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gm10295Q8CCF3 114 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gm815Q3UWS2 115 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Naa38Q9D2U5 125 aa9.64□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Tmem263Q9DAM7 115 aa9.63□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gm7257D3YX25 99 aa9.63□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Ndufa1O35683 70 aa9.63□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Zfp646Q6NV66 1788 aa9.63□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Trbv13-1A0A0B4J1P8 112 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gm20499D3Z4G5 72 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Greb1Q3UHK3 1954 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Zfp648D3Z0W3 525 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Rspo1Q9Z132 265 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Igkv1-122A0A140T8M9 119 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Igkv3-9A0A140T8P4 119 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gm1968Q3T9I3 115 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 SptssbQ925E8 76 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Dock3Q8CIQ7 2027 aa9.62□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gvin1Q80SU7 2427 aa9.61□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 P01738 130 aa9.61□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Hivep3A2A884 2348 aa9.61□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gm10251J3QPM5 127 aa9.61□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Zfp36P22893 319 aaKnown RBP9.61□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Gata4Q08369 441 aa9.61□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 4933414I15RikQ9D4D5 133 aa9.61□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Ncoa6Q9JL19 2067 aa9.6□□□□□ -0.87
Pcdhac1-201ENSMUST00000007584 Ighv1-39A0A075B5V5 117 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 69.2 ms