RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Sdk1Q3UH53 2193 aa9.32□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ighv14-2A0A075B5R7 117 aa9.32□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Gm5878E9PUB3 99 aa9.32□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Cfc1P97766 202 aa9.32□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ankrd39Q9D2X0 183 aa9.32□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Sptbn1Q62261 2363 aaKnown RBP9.31□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Trav8-1A0A075B641 109 aa9.31□□□□□ -0.92
Ufd1-201ENSMUST00000005394 P01794 123 aa9.31□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Dlx1Q64317 255 aa9.31□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Psmb11Q8BG41 302 aa9.31□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Gm12845A0A0N4SUM5 588 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Cnih1O35372 144 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ube2d1P61080 147 aaKnown RBP9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ssbp4Q3U4B1 363 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Higd1cQ76I25 96 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Xlr5cQ9JJR2 179 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Gm28269A0A087WSG3 125 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ighv7-4A0A0A6YXL5 121 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Umad1E0CX23 159 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 PspnO70300 156 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 P01802 115 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 P01837 106 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Cd24P24807 76 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ube2d3P61079 147 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ube2d2P62838 147 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Mrpl33Q9CQP0 65 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 RhohQ9D3G9 191 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Avpi1Q9D7H4 142 aa9.3□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ighv1-4A0A075B5T4 117 aa9.29□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Ighv1-55A0A075B5W6 117 aa9.29□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Trav19A0A0B4J1K4 119 aa9.29□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Trav7-5A0A0G2JFX6 112 aa9.29□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Sertad4A7DTG3 377 aa9.29□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Cxcl13O55038 109 aa9.29□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Srp14P16254 110 aaKnown RBP9.29□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Gm5941Q497P9 117 aa9.29□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Smrp1Q2MH31 260 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Sdhaf1Q3U276 118 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Nhlrc1Q8BR37 401 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 NpbQ8K4P1 119 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Vmn1r62Q8R2C0 300 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Prss41Q920S2 322 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Mustn1Q99JI1 82 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Prr13Q9CQJ5 137 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Cdx4Q07424 282 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Klhdc1Q80YG3 406 aa9.28□□□□□ -0.92
Ufd1-201ENSMUST00000005394 Rbfox3Q8BIF2 374 aa9.27□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Hif1anQ8BLR9 349 aa9.27□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ormdl2Q9CQZ0 153 aa9.27□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Dopey1Q8BL99 2399 aa9.27□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ighv1-53A0A075B5W3 117 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 P01812 117 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 TcraP01849 138 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Myod1P10085 318 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ttc28Q80XJ3 2450 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 CadB2RQC6 2225 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 LrbaQ9ESE1 2856 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ighv12-3A0A075B5T1 117 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Trav4n-4A0A075B615 110 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gsx1P31315 261 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 MdfiP70331 251 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm10192Q3V0S1 108 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ndufa4Q62425 82 aaKnown RBP9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ndufb3Q9CQZ6 104 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 8030423J24RikQ9CX45 142 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Npc2Q9Z0J0 149 aa9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Usp9xP70398 2559 aaKnown RBP9.26□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Akap6E9Q9K8 2307 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ighv7-3A0A075B5R2 120 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm6525A0A0A6YW33 106 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 CrygbP04344 175 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Arpc1aQ9R0Q6 370 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Timm23Q9WTQ8 209 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Cmya5Q70KF4 3739 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm9195A0A140LHT4 2805 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Bahcc1Q3UHR0 2643 aa9.25□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Igkv4-71A0A0G2JEH0 117 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Tcrg-C3L7N479 172 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 P03985 172 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 LoxP28301 411 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 NrepQ07475 68 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Tmem14cQ9CQN6 114 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Plac1Q9JI83 173 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Igkv4-90A0A075B5L3 117 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm6812B1AXU1 112 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 P01783 136 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Defa3P28310 93 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ccl11P48298 97 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Defa10P50708 93 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Defa15P50713 93 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Rnf182Q8C432 247 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 RpeQ8VEE0 228 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Tac4Q99N14 128 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gemin7Q9CWY4 129 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Dpm2Q9Z324 84 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Chd6A3KFM7 2711 aa9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 FlncQ8VHX6 2726 aaKnown RBP9.24□□□□□ -0.93
Ufd1-201ENSMUST00000005394 AcanQ61282 2132 aaKnown RBP9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Lgals6O54891 301 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 P18527 97 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 171.4 ms