RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 NSD1Q96L73 2696 aaPredicted RBP0.98□□□□□ -2.25
RFC1-217ENST00000639695 IGSF10Q6WRI0 2623 aa0.98□□□□□ -2.25
RFC1-217ENST00000639695 PKHD1P08F94 4074 aa0.98□□□□□ -2.25
RFC1-217ENST00000639695 LRP1Q07954 4544 aaKnown RBP0.97□□□□□ -2.25
RFC1-217ENST00000639695 TNXBP22105 4242 aa0.97□□□□□ -2.25
RFC1-217ENST00000639695 DYNC1H1Q14204 4646 aaKnown RBP0.95□□□□□ -2.26
RFC1-217ENST00000639695 SPRR2GQ9BYE4 73 aa0.94□□□□□ -2.26
RFC1-217ENST00000639695 STARD9Q9P2P6 4700 aa0.94□□□□□ -2.26
RFC1-217ENST00000639695 MAST4O15021 2626 aa0.93□□□□□ -2.26
RFC1-217ENST00000639695 PRM1P04553 51 aa0.93□□□□□ -2.26
RFC1-217ENST00000639695 LPAP08519 4548 aa0.91□□□□□ -2.26
RFC1-217ENST00000639695 KRTAP19-5Q3LI72 72 aa0.91□□□□□ -2.26
RFC1-217ENST00000639695 FLNBO75369 2602 aaKnown RBP0.91□□□□□ -2.26
RFC1-217ENST00000639695 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
RFC1-217ENST00000639695 MT1AP04731 61 aa0.89□□□□□ -2.27
RFC1-217ENST00000639695 HERC1Q15751 4861 aa0.86□□□□□ -2.27
RFC1-217ENST00000639695 FAT1Q14517 4588 aa0.86□□□□□ -2.27
RFC1-217ENST00000639695 MUC17Q685J3 4493 aa0.85□□□□□ -2.27
RFC1-217ENST00000639695 MT1EP04732 61 aa0.84□□□□□ -2.27
RFC1-217ENST00000639695 SPRR2BP35325 72 aa0.84□□□□□ -2.27
RFC1-217ENST00000639695 SPRR2AP35326 72 aa0.84□□□□□ -2.27
RFC1-217ENST00000639695 KRTAP19-8Q3LI54 63 aa0.84□□□□□ -2.27
RFC1-217ENST00000639695 LRP1BQ9NZR2 4599 aa0.83□□□□□ -2.28
RFC1-217ENST00000639695 SPRR2DP22532 72 aa0.81□□□□□ -2.28
RFC1-217ENST00000639695 MT1XP80297 61 aa0.81□□□□□ -2.28
RFC1-217ENST00000639695 MT1LQ93083 61 aa0.81□□□□□ -2.28
RFC1-217ENST00000639695 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
RFC1-217ENST00000639695 LRP2P98164 4655 aa0.78□□□□□ -2.28
RFC1-217ENST00000639695 KRTAP19-2Q3LHN2 52 aa0.78□□□□□ -2.28
RFC1-217ENST00000639695 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
RFC1-217ENST00000639695 SPRR2EP22531 72 aa0.77□□□□□ -2.29
RFC1-217ENST00000639695 MT1HL1P0DM35 61 aa0.75□□□□□ -2.29
RFC1-217ENST00000639695 MT1HP80294 61 aa0.75□□□□□ -2.29
RFC1-217ENST00000639695 DNHD1Q96M86 4753 aa0.74□□□□□ -2.29
RFC1-217ENST00000639695 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
RFC1-217ENST00000639695 MT1BP07438 61 aa0.73□□□□□ -2.29
RFC1-217ENST00000639695 HMCN2Q8NDA2 5059 aa0.72□□□□□ -2.29
RFC1-217ENST00000639695 KRTAP19-7Q3SYF9 63 aa0.7□□□□□ -2.3
RFC1-217ENST00000639695 FAT4Q6V0I7 4981 aa0.7□□□□□ -2.3
RFC1-217ENST00000639695 MT2AP02795 61 aa0.68□□□□□ -2.3
RFC1-217ENST00000639695 MT1GP13640 62 aa0.68□□□□□ -2.3
RFC1-217ENST00000639695 MT1FP04733 61 aa0.67□□□□□ -2.3
RFC1-217ENST00000639695 HYDINQ4G0P3 5121 aa0.67□□□□□ -2.3
RFC1-217ENST00000639695 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
RFC1-217ENST00000639695 MUC2Q02817 5179 aa0.66□□□□□ -2.3
RFC1-217ENST00000639695 MDN1Q9NU22 5596 aa0.65□□□□□ -2.31
RFC1-217ENST00000639695 BIRC6Q9NR09 4857 aa0.64□□□□□ -2.31
RFC1-217ENST00000639695 MT1MQ8N339 61 aa0.64□□□□□ -2.31
RFC1-217ENST00000639695 RYR3Q15413 4870 aa0.63□□□□□ -2.31
RFC1-217ENST00000639695 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
RFC1-217ENST00000639695 HERC2O95714 4834 aa0.63□□□□□ -2.31
RFC1-217ENST00000639695 KMT2CQ8NEZ4 4911 aaKnown RBP0.62□□□□□ -2.31
RFC1-217ENST00000639695 RYR1P21817 5038 aa0.6□□□□□ -2.31
RFC1-217ENST00000639695 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
RFC1-217ENST00000639695 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
RFC1-217ENST00000639695 PCLOQ9Y6V0 5065 aa0.58□□□□□ -2.32
RFC1-217ENST00000639695 RYR2Q92736 4967 aa0.58□□□□□ -2.32
RFC1-217ENST00000639695 UBR4Q5T4S7 5183 aa0.56□□□□□ -2.32
RFC1-217ENST00000639695 USH2AO75445 5202 aa0.54□□□□□ -2.32
RFC1-217ENST00000639695 SSPOA2VEC9 5147 aa0.51□□□□□ -2.33
RFC1-217ENST00000639695 RNF213Q63HN8 5207 aa0.5□□□□□ -2.33
RFC1-217ENST00000639695 ABCA13Q86UQ4 5058 aa0.47□□□□□ -2.33
RFC1-217ENST00000639695 EPPK1P58107 5090 aaKnown RBP0.45□□□□□ -2.34
RFC1-217ENST00000639695 KIAA1109Q2LD37 5005 aa0.45□□□□□ -2.34
RFC1-217ENST00000639695 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
RFC1-217ENST00000639695 KRTAP19-6Q3LI70 58 aa0.42□□□□□ -2.34
RFC1-217ENST00000639695 KMT2DO14686 5537 aa0.41□□□□□ -2.34
RFC1-217ENST00000639695 MUC12Q9UKN1 5478 aa0.31□□□□□ -2.36
RFC1-217ENST00000639695 KRTAP20-2Q3LI61 65 aa0.28□□□□□ -2.36
RFC1-217ENST00000639695 MT4P47944 62 aa0.26□□□□□ -2.37
RFC1-217ENST00000639695 KRTAP20-1Q3LI63 56 aa0.22□□□□□ -2.37
RFC1-217ENST00000639695 DSTQ03001 7570 aaKnown RBP0.21□□□□□ -2.38
RFC1-217ENST00000639695 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
RFC1-217ENST00000639695 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
RFC1-217ENST00000639695 GPR98Q8WXG9 6306 aa0.09□□□□□ -2.39
RFC1-217ENST00000639695 NEBP20929 6669 aa0.08□□□□□ -2.4
RFC1-217ENST00000639695 MACF1Q9UPN3 7388 aaKnown RBP-0.01□□□□□ -2.41
Retrieved 77 of 20,778 RNA–protein pairs in 269.4 ms