RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 MT1AP04731 61 aa3.62□□□□□ -1.83
UBE3A-228ENST00000638155 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
UBE3A-228ENST00000638155 LPAP08519 4548 aa3.62□□□□□ -1.83
UBE3A-228ENST00000638155 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
UBE3A-228ENST00000638155 HYDINQ4G0P3 5121 aa3.61□□□□□ -1.83
UBE3A-228ENST00000638155 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
UBE3A-228ENST00000638155 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
UBE3A-228ENST00000638155 KMT2CQ8NEZ4 4911 aaKnown RBP3.48□□□□□ -1.85
UBE3A-228ENST00000638155 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
UBE3A-228ENST00000638155 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
UBE3A-228ENST00000638155 RYR2Q92736 4967 aa3.44□□□□□ -1.86
UBE3A-228ENST00000638155 RYR3Q15413 4870 aa3.44□□□□□ -1.86
UBE3A-228ENST00000638155 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
UBE3A-228ENST00000638155 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
UBE3A-228ENST00000638155 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
UBE3A-228ENST00000638155 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
UBE3A-228ENST00000638155 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
UBE3A-228ENST00000638155 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
UBE3A-228ENST00000638155 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
UBE3A-228ENST00000638155 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
UBE3A-228ENST00000638155 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
UBE3A-228ENST00000638155 EPPK1P58107 5090 aaKnown RBP3.25□□□□□ -1.89
UBE3A-228ENST00000638155 RYR1P21817 5038 aa3.24□□□□□ -1.89
UBE3A-228ENST00000638155 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
UBE3A-228ENST00000638155 KRTAP19-2Q3LHN2 52 aa3.16□□□□□ -1.9
UBE3A-228ENST00000638155 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
UBE3A-228ENST00000638155 LRP2P98164 4655 aa3.08□□□□□ -1.92
UBE3A-228ENST00000638155 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
UBE3A-228ENST00000638155 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
UBE3A-228ENST00000638155 HERC2O95714 4834 aa3.06□□□□□ -1.92
UBE3A-228ENST00000638155 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
UBE3A-228ENST00000638155 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
UBE3A-228ENST00000638155 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
UBE3A-228ENST00000638155 BIRC6Q9NR09 4857 aa2.95□□□□□ -1.94
UBE3A-228ENST00000638155 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
UBE3A-228ENST00000638155 HERC1Q15751 4861 aa2.92□□□□□ -1.94
UBE3A-228ENST00000638155 MUC2Q02817 5179 aa2.85□□□□□ -1.95
UBE3A-228ENST00000638155 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
UBE3A-228ENST00000638155 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
UBE3A-228ENST00000638155 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
UBE3A-228ENST00000638155 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
UBE3A-228ENST00000638155 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
UBE3A-228ENST00000638155 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
UBE3A-228ENST00000638155 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.98
UBE3A-228ENST00000638155 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
UBE3A-228ENST00000638155 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
UBE3A-228ENST00000638155 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
UBE3A-228ENST00000638155 NEBP20929 6669 aa2.47□□□□□ -2.01
UBE3A-228ENST00000638155 USH2AO75445 5202 aa2.39□□□□□ -2.03
UBE3A-228ENST00000638155 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
UBE3A-228ENST00000638155 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
UBE3A-228ENST00000638155 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
UBE3A-228ENST00000638155 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
UBE3A-228ENST00000638155 SSPOA2VEC9 5147 aa2.28□□□□□ -2.04
UBE3A-228ENST00000638155 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
UBE3A-228ENST00000638155 KMT2DO14686 5537 aa2.25□□□□□ -2.05
UBE3A-228ENST00000638155 KRTAP5-3Q6L8H2 238 aa2.14□□□□□ -2.07
UBE3A-228ENST00000638155 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
UBE3A-228ENST00000638155 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
UBE3A-228ENST00000638155 MUC12Q9UKN1 5478 aa2.05□□□□□ -2.08
UBE3A-228ENST00000638155 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
UBE3A-228ENST00000638155 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
UBE3A-228ENST00000638155 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
UBE3A-228ENST00000638155 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
UBE3A-228ENST00000638155 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
UBE3A-228ENST00000638155 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.12
UBE3A-228ENST00000638155 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
UBE3A-228ENST00000638155 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
UBE3A-228ENST00000638155 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
UBE3A-228ENST00000638155 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
UBE3A-228ENST00000638155 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
UBE3A-228ENST00000638155 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.17
UBE3A-228ENST00000638155 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
UBE3A-228ENST00000638155 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
UBE3A-228ENST00000638155 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
UBE3A-228ENST00000638155 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
UBE3A-228ENST00000638155 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 204.3 ms