RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TNP1P09430 55 aa6.37□□□□□ -1.39
CLN6-220ENST00000637450 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
CLN6-220ENST00000637450 KRTAP5-10Q6L8G5 202 aa6.31□□□□□ -1.4
CLN6-220ENST00000637450 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
CLN6-220ENST00000637450 KRTAP12-3P60328 96 aa6.18□□□□□ -1.42
CLN6-220ENST00000637450 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
CLN6-220ENST00000637450 PRR15LQ9BU68 103 aa6.1□□□□□ -1.43
CLN6-220ENST00000637450 KRTAP5-7Q6L8G8 165 aa6.09□□□□□ -1.43
CLN6-220ENST00000637450 KRTAP20-2Q3LI61 65 aa6.07□□□□□ -1.44
CLN6-220ENST00000637450 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
CLN6-220ENST00000637450 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
CLN6-220ENST00000637450 ANAPC13Q9BS18 74 aa6.03□□□□□ -1.44
CLN6-220ENST00000637450 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
CLN6-220ENST00000637450 H3BS24 57 aa5.98□□□□□ -1.45
CLN6-220ENST00000637450 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
CLN6-220ENST00000637450 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
CLN6-220ENST00000637450 CCDC179H3BU77 68 aa5.95□□□□□ -1.46
CLN6-220ENST00000637450 ATP5EP56381 51 aaPredicted RBP5.95□□□□□ -1.46
CLN6-220ENST00000637450 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
CLN6-220ENST00000637450 UQCR11O14957 56 aa5.91□□□□□ -1.46
CLN6-220ENST00000637450 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
CLN6-220ENST00000637450 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
CLN6-220ENST00000637450 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
CLN6-220ENST00000637450 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
CLN6-220ENST00000637450 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
CLN6-220ENST00000637450 K7ERS5 55 aa5.68□□□□□ -1.5
CLN6-220ENST00000637450 TMEM258P61165 79 aa5.68□□□□□ -1.5
CLN6-220ENST00000637450 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
CLN6-220ENST00000637450 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
CLN6-220ENST00000637450 KRTAP5-2Q701N4 177 aa5.59□□□□□ -1.51
CLN6-220ENST00000637450 MT1AP04731 61 aa5.56□□□□□ -1.52
CLN6-220ENST00000637450 PCP4P48539 62 aa5.55□□□□□ -1.52
CLN6-220ENST00000637450 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
CLN6-220ENST00000637450 PSPHP1O15172 72 aa5.49□□□□□ -1.53
CLN6-220ENST00000637450 V9GYY9 64 aa5.45□□□□□ -1.54
CLN6-220ENST00000637450 KRTAP5-8O75690 187 aa5.43□□□□□ -1.54
CLN6-220ENST00000637450 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
CLN6-220ENST00000637450 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
CLN6-220ENST00000637450 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
CLN6-220ENST00000637450 Q1T7F1 81 aa5.41□□□□□ -1.54
CLN6-220ENST00000637450 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
CLN6-220ENST00000637450 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
CLN6-220ENST00000637450 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
CLN6-220ENST00000637450 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
CLN6-220ENST00000637450 MUC5ACP98088 5654 aa5.35□□□□□ -1.55
CLN6-220ENST00000637450 CDC42SE1Q9NRR8 79 aa5.34□□□□□ -1.55
CLN6-220ENST00000637450 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
CLN6-220ENST00000637450 A6NED7 52 aa5.27□□□□□ -1.57
CLN6-220ENST00000637450 ROMO1P60602 79 aa5.26□□□□□ -1.57
CLN6-220ENST00000637450 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
CLN6-220ENST00000637450 MT3P25713 68 aa5.11□□□□□ -1.59
CLN6-220ENST00000637450 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
CLN6-220ENST00000637450 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
CLN6-220ENST00000637450 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
CLN6-220ENST00000637450 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
CLN6-220ENST00000637450 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
CLN6-220ENST00000637450 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
CLN6-220ENST00000637450 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
CLN6-220ENST00000637450 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
CLN6-220ENST00000637450 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
CLN6-220ENST00000637450 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
CLN6-220ENST00000637450 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
CLN6-220ENST00000637450 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
CLN6-220ENST00000637450 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
CLN6-220ENST00000637450 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
CLN6-220ENST00000637450 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
CLN6-220ENST00000637450 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
CLN6-220ENST00000637450 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
CLN6-220ENST00000637450 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CLN6-220ENST00000637450 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
CLN6-220ENST00000637450 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
CLN6-220ENST00000637450 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CLN6-220ENST00000637450 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
CLN6-220ENST00000637450 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
CLN6-220ENST00000637450 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
CLN6-220ENST00000637450 INE1O15225 51 aa2.73□□□□□ -1.97
CLN6-220ENST00000637450 PRM1P04553 51 aa2.66□□□□□ -1.98
CLN6-220ENST00000637450 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 80.6 ms