RNA–Protein interactions for RNA: ENST00000636257.1

SPTAN1-230, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-230ENST00000636257 ATP5EP2Q5VTU8 51 aa3.31□□□□□ -1.88
SPTAN1-230ENST00000636257 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SPTAN1-230ENST00000636257 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
SPTAN1-230ENST00000636257 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
SPTAN1-230ENST00000636257 SCGB1A1P11684 91 aa3.21□□□□□ -1.9
SPTAN1-230ENST00000636257 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
SPTAN1-230ENST00000636257 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
SPTAN1-230ENST00000636257 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
SPTAN1-230ENST00000636257 A0A1B0GU33 70 aa3.13□□□□□ -1.91
SPTAN1-230ENST00000636257 ETDBQ3ZM63 59 aa3.13□□□□□ -1.91
SPTAN1-230ENST00000636257 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
SPTAN1-230ENST00000636257 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
SPTAN1-230ENST00000636257 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
SPTAN1-230ENST00000636257 SEC61GP60059 68 aa3.09□□□□□ -1.91
SPTAN1-230ENST00000636257 KRTAP15-1Q3LI76 137 aa3.09□□□□□ -1.91
SPTAN1-230ENST00000636257 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
SPTAN1-230ENST00000636257 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
SPTAN1-230ENST00000636257 SMIM26A0A096LP01 95 aa3.05□□□□□ -1.92
SPTAN1-230ENST00000636257 FAM240AA0A1B0GVK7 77 aa3.05□□□□□ -1.92
SPTAN1-230ENST00000636257 A8MU10 97 aa3.03□□□□□ -1.92
SPTAN1-230ENST00000636257 F8W1H4 67 aa3.01□□□□□ -1.93
SPTAN1-230ENST00000636257 LINC00643Q86TS7 51 aa2.99□□□□□ -1.93
SPTAN1-230ENST00000636257 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
SPTAN1-230ENST00000636257 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
SPTAN1-230ENST00000636257 SMIM6P0DI80 62 aa2.86□□□□□ -1.95
SPTAN1-230ENST00000636257 SPANXA2-OT1Q8N9U9 137 aa2.86□□□□□ -1.95
SPTAN1-230ENST00000636257 TMA7Q9Y2S6 64 aaKnown RBP2.84□□□□□ -1.95
SPTAN1-230ENST00000636257 COL5A1-AS1Q5SY13 56 aa2.83□□□□□ -1.96
SPTAN1-230ENST00000636257 COA5Q86WW8 74 aa2.83□□□□□ -1.96
SPTAN1-230ENST00000636257 SERP2Q8N6R1 65 aa2.82□□□□□ -1.96
SPTAN1-230ENST00000636257 SNURFQ9Y675 71 aa2.75□□□□□ -1.97
SPTAN1-230ENST00000636257 KRTAP23-1A1A580 65 aa2.74□□□□□ -1.97
SPTAN1-230ENST00000636257 A0A1B0GU69 56 aa2.7□□□□□ -1.98
SPTAN1-230ENST00000636257 H7BZZ5 65 aa2.7□□□□□ -1.98
SPTAN1-230ENST00000636257 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
SPTAN1-230ENST00000636257 SMIM20Q8N5G0 67 aa2.66□□□□□ -1.98
SPTAN1-230ENST00000636257 PRR15LQ9BU68 103 aa2.6□□□□□ -1.99
SPTAN1-230ENST00000636257 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SPTAN1-230ENST00000636257 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SPTAN1-230ENST00000636257 RPS28P62857 69 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-230ENST00000636257 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SPTAN1-230ENST00000636257 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SPTAN1-230ENST00000636257 J3QR89 54 aa2.27□□□□□ -2.05
SPTAN1-230ENST00000636257 UQCR11O14957 56 aa2.27□□□□□ -2.05
SPTAN1-230ENST00000636257 K7ERS5 55 aa2.25□□□□□ -2.05
SPTAN1-230ENST00000636257 LOC105371267A0A1B0GV96 52 aa2.22□□□□□ -2.05
SPTAN1-230ENST00000636257 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
SPTAN1-230ENST00000636257 LINC01558Q9Y6Z2 57 aa2.14□□□□□ -2.07
SPTAN1-230ENST00000636257 MIR22HGQ0VDD5 57 aa2.13□□□□□ -2.07
SPTAN1-230ENST00000636257 PCP4L1A6NKN8 68 aa2.04□□□□□ -2.08
SPTAN1-230ENST00000636257 CDC42SE1Q9NRR8 79 aa2.02□□□□□ -2.09
SPTAN1-230ENST00000636257 A0A1B0GV90 55 aa1.99□□□□□ -2.09
SPTAN1-230ENST00000636257 COX7CP15954 63 aa1.96□□□□□ -2.1
SPTAN1-230ENST00000636257 ROMO1P60602 79 aa1.94□□□□□ -2.1
SPTAN1-230ENST00000636257 Q1T7F1 81 aa1.92□□□□□ -2.1
SPTAN1-230ENST00000636257 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
SPTAN1-230ENST00000636257 K7ERU9 68 aa1.77□□□□□ -2.13
SPTAN1-230ENST00000636257 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
SPTAN1-230ENST00000636257 ATP5EP56381 51 aaPredicted RBP1.7□□□□□ -2.14
SPTAN1-230ENST00000636257 PSPHP1O15172 72 aa1.6□□□□□ -2.15
SPTAN1-230ENST00000636257 A6NED7 52 aa1.48□□□□□ -2.17
SPTAN1-230ENST00000636257 V9GYY9 64 aa1.43□□□□□ -2.18
SPTAN1-230ENST00000636257 CCDC179H3BU77 68 aa1.42□□□□□ -2.18
SPTAN1-230ENST00000636257 ANAPC13Q9BS18 74 aa1.39□□□□□ -2.19
SPTAN1-230ENST00000636257 TMEM258P61165 79 aa1.31□□□□□ -2.2
SPTAN1-230ENST00000636257 PRM1P04553 51 aa0.93□□□□□ -2.26
SPTAN1-230ENST00000636257 BRK1Q8WUW1 75 aa0.55□□□□□ -2.32
SPTAN1-230ENST00000636257 LUZP6Q538Z0 58 aa0.48□□□□□ -2.33
SPTAN1-230ENST00000636257 PRAC1Q96KF2 57 aa0.4□□□□□ -2.35
SPTAN1-230ENST00000636257 PMAIP1Q13794 54 aa0.14□□□□□ -2.39
SPTAN1-230ENST00000636257 SVIPQ8NHG7 77 aa-0.29□□□□□ -2.46
SPTAN1-230ENST00000636257 KTN1-AS1Q86SY8 53 aa-0.45□□□□□ -2.48
SPTAN1-230ENST00000636257 PCP4P48539 62 aa-0.56□□□□□ -2.5
SPTAN1-230ENST00000636257 NDUFAF8A1L188 74 aa-0.66□□□□□ -2.52
SPTAN1-230ENST00000636257 INE1O15225 51 aa-0.73□□□□□ -2.53
SPTAN1-230ENST00000636257 PRO0628Q9UI54 55 aa-0.75□□□□□ -2.53
SPTAN1-230ENST00000636257 A0A0A0MQY5 61 aa-1.17□□□□□ -2.6
SPTAN1-230ENST00000636257 H3BS24 57 aa-3.6□□□□□ -2.99
Retrieved 78 of 20,778 RNA–protein pairs in 159.3 ms