RNA–Protein interactions for RNA: ENST00000628267.2

UBE3A-215, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-215ENST00000628267 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
UBE3A-215ENST00000628267 A0A1B0GU33 70 aa6.99□□□□□ -1.29
UBE3A-215ENST00000628267 KRTAP5-7Q6L8G8 165 aa6.97□□□□□ -1.29
UBE3A-215ENST00000628267 SPATA8Q6RVD6 105 aa6.95□□□□□ -1.3
UBE3A-215ENST00000628267 V9GYY9 64 aa6.95□□□□□ -1.3
UBE3A-215ENST00000628267 KRTAP5-3Q6L8H2 238 aa6.92□□□□□ -1.3
UBE3A-215ENST00000628267 KRTAP12-1P59990 96 aa6.91□□□□□ -1.3
UBE3A-215ENST00000628267 Q1T7F1 81 aa6.91□□□□□ -1.3
UBE3A-215ENST00000628267 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
UBE3A-215ENST00000628267 A0A1B0GU69 56 aa6.87□□□□□ -1.31
UBE3A-215ENST00000628267 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
UBE3A-215ENST00000628267 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
UBE3A-215ENST00000628267 PRR15LQ9BU68 103 aa6.81□□□□□ -1.32
UBE3A-215ENST00000628267 PSPHP1O15172 72 aa6.77□□□□□ -1.33
UBE3A-215ENST00000628267 TNP1P09430 55 aa6.75□□□□□ -1.33
UBE3A-215ENST00000628267 KRTAP20-2Q3LI61 65 aa6.75□□□□□ -1.33
UBE3A-215ENST00000628267 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
UBE3A-215ENST00000628267 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
UBE3A-215ENST00000628267 A8MU10 97 aa6.63□□□□□ -1.35
UBE3A-215ENST00000628267 KRTAP5-5Q701N2 237 aaPredicted RBP6.63□□□□□ -1.35
UBE3A-215ENST00000628267 A6NED7 52 aa6.61□□□□□ -1.35
UBE3A-215ENST00000628267 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
UBE3A-215ENST00000628267 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
UBE3A-215ENST00000628267 UQCR11O14957 56 aa6.55□□□□□ -1.36
UBE3A-215ENST00000628267 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
UBE3A-215ENST00000628267 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
UBE3A-215ENST00000628267 MIR22HGQ0VDD5 57 aa6.48□□□□□ -1.37
UBE3A-215ENST00000628267 PRO0628Q9UI54 55 aa6.39□□□□□ -1.39
UBE3A-215ENST00000628267 LOC100996750A0A140TA64 210 aa6.38□□□□□ -1.39
UBE3A-215ENST00000628267 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
UBE3A-215ENST00000628267 KRTAP4-11Q9BYQ6 195 aa6.29□□□□□ -1.4
UBE3A-215ENST00000628267 K7ERS5 55 aa6.28□□□□□ -1.4
UBE3A-215ENST00000628267 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
UBE3A-215ENST00000628267 SVIPQ8NHG7 77 aa6.22□□□□□ -1.41
UBE3A-215ENST00000628267 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
UBE3A-215ENST00000628267 PMAIP1Q13794 54 aa6.17□□□□□ -1.42
UBE3A-215ENST00000628267 KRTAP5-2Q701N4 177 aa6.15□□□□□ -1.42
UBE3A-215ENST00000628267 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
UBE3A-215ENST00000628267 MT1AP04731 61 aa6.03□□□□□ -1.44
UBE3A-215ENST00000628267 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
UBE3A-215ENST00000628267 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
UBE3A-215ENST00000628267 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
UBE3A-215ENST00000628267 MUC5ACP98088 5654 aa5.99□□□□□ -1.45
UBE3A-215ENST00000628267 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
UBE3A-215ENST00000628267 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
UBE3A-215ENST00000628267 ROMO1P60602 79 aa5.93□□□□□ -1.46
UBE3A-215ENST00000628267 AHNAKQ09666 5890 aaKnown RBP5.93□□□□□ -1.46
UBE3A-215ENST00000628267 MUC5BQ9HC84 5762 aaPredicted RBP5.9□□□□□ -1.47
UBE3A-215ENST00000628267 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
UBE3A-215ENST00000628267 OBSCNQ5VST9 7968 aa5.89□□□□□ -1.47
UBE3A-215ENST00000628267 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
UBE3A-215ENST00000628267 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
UBE3A-215ENST00000628267 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
UBE3A-215ENST00000628267 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
UBE3A-215ENST00000628267 KRTAP5-1Q6L8H4 278 aa5.61□□□□□ -1.51
UBE3A-215ENST00000628267 MT3P25713 68 aa5.56□□□□□ -1.52
UBE3A-215ENST00000628267 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
UBE3A-215ENST00000628267 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
UBE3A-215ENST00000628267 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
UBE3A-215ENST00000628267 LCE1CQ5T751 118 aa4.85□□□□□ -1.63
UBE3A-215ENST00000628267 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
UBE3A-215ENST00000628267 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
UBE3A-215ENST00000628267 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
UBE3A-215ENST00000628267 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
UBE3A-215ENST00000628267 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
UBE3A-215ENST00000628267 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
UBE3A-215ENST00000628267 H3BS24 57 aa4.28□□□□□ -1.72
UBE3A-215ENST00000628267 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
UBE3A-215ENST00000628267 PHGR1C9JFL3 82 aa4.21□□□□□ -1.74
UBE3A-215ENST00000628267 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
UBE3A-215ENST00000628267 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
UBE3A-215ENST00000628267 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
UBE3A-215ENST00000628267 INE1O15225 51 aa3.84□□□□□ -1.79
UBE3A-215ENST00000628267 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
UBE3A-215ENST00000628267 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
UBE3A-215ENST00000628267 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
UBE3A-215ENST00000628267 PRM1P04553 51 aa3.08□□□□□ -1.92
UBE3A-215ENST00000628267 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 13.9 ms