RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 LCE4AQ5TA78 99 aa2.06□□□□□ -2.08
CHD2-208ENST00000626874 HYDINQ4G0P3 5121 aa2.06□□□□□ -2.08
CHD2-208ENST00000626874 PRM1P04553 51 aa2.05□□□□□ -2.08
CHD2-208ENST00000626874 MT1AP04731 61 aa2.03□□□□□ -2.08
CHD2-208ENST00000626874 KRTAP9-7A8MTY7 169 aa2.02□□□□□ -2.09
CHD2-208ENST00000626874 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
CHD2-208ENST00000626874 EPPK1P58107 5090 aaKnown RBP1.99□□□□□ -2.09
CHD2-208ENST00000626874 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
CHD2-208ENST00000626874 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
CHD2-208ENST00000626874 HERC1Q15751 4861 aa1.97□□□□□ -2.09
CHD2-208ENST00000626874 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
CHD2-208ENST00000626874 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
CHD2-208ENST00000626874 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
CHD2-208ENST00000626874 TNXBP22105 4242 aa1.93□□□□□ -2.1
CHD2-208ENST00000626874 KRTAP4-7Q9BYR0 210 aa1.93□□□□□ -2.1
CHD2-208ENST00000626874 ABCA13Q86UQ4 5058 aa1.92□□□□□ -2.1
CHD2-208ENST00000626874 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
CHD2-208ENST00000626874 LRP2P98164 4655 aa1.89□□□□□ -2.11
CHD2-208ENST00000626874 LCE2AQ5TA79 106 aaPredicted RBP1.88□□□□□ -2.11
CHD2-208ENST00000626874 KRTAP9-9Q9BYP9 154 aa1.88□□□□□ -2.11
CHD2-208ENST00000626874 LOC100996750A0A140TA64 210 aa1.87□□□□□ -2.11
CHD2-208ENST00000626874 KRTAP9-4Q9BYQ2 154 aa1.87□□□□□ -2.11
CHD2-208ENST00000626874 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.86□□□□□ -2.11
CHD2-208ENST00000626874 KRTAP19-7Q3SYF9 63 aa1.84□□□□□ -2.11
CHD2-208ENST00000626874 MUC17Q685J3 4493 aa1.83□□□□□ -2.12
CHD2-208ENST00000626874 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
CHD2-208ENST00000626874 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
CHD2-208ENST00000626874 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
CHD2-208ENST00000626874 LPAP08519 4548 aa1.81□□□□□ -2.12
CHD2-208ENST00000626874 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.12
CHD2-208ENST00000626874 RNF213Q63HN8 5207 aa1.77□□□□□ -2.13
CHD2-208ENST00000626874 KRTAP4-9Q9BYQ8 210 aa1.76□□□□□ -2.13
CHD2-208ENST00000626874 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
CHD2-208ENST00000626874 FAT4Q6V0I7 4981 aa1.74□□□□□ -2.13
CHD2-208ENST00000626874 SYNE2Q8WXH0 6885 aaKnown RBP1.73□□□□□ -2.13
CHD2-208ENST00000626874 FSIP2Q5CZC0 6907 aa1.71□□□□□ -2.14
CHD2-208ENST00000626874 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
CHD2-208ENST00000626874 MUC2Q02817 5179 aa1.61□□□□□ -2.15
CHD2-208ENST00000626874 KRTAP5-9P26371 169 aa1.57□□□□□ -2.16
CHD2-208ENST00000626874 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
CHD2-208ENST00000626874 SSPOA2VEC9 5147 aa1.53□□□□□ -2.16
CHD2-208ENST00000626874 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
CHD2-208ENST00000626874 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
CHD2-208ENST00000626874 USH2AO75445 5202 aa1.5□□□□□ -2.17
CHD2-208ENST00000626874 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
CHD2-208ENST00000626874 NEBP20929 6669 aa1.49□□□□□ -2.17
CHD2-208ENST00000626874 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
CHD2-208ENST00000626874 KRTAP4-2Q9BYR5 136 aa1.44□□□□□ -2.18
CHD2-208ENST00000626874 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
CHD2-208ENST00000626874 KRTAP4-11Q9BYQ6 195 aa1.43□□□□□ -2.18
CHD2-208ENST00000626874 KRTAP4-6Q9BYQ5 205 aa1.43□□□□□ -2.18
CHD2-208ENST00000626874 MACF1Q9UPN3 7388 aaKnown RBP1.41□□□□□ -2.18
CHD2-208ENST00000626874 KMT2DO14686 5537 aa1.4□□□□□ -2.19
CHD2-208ENST00000626874 KRTAP4-12Q9BQ66 201 aa1.32□□□□□ -2.2
CHD2-208ENST00000626874 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
CHD2-208ENST00000626874 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
CHD2-208ENST00000626874 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
CHD2-208ENST00000626874 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
CHD2-208ENST00000626874 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
CHD2-208ENST00000626874 MUC5ACP98088 5654 aa1.27□□□□□ -2.21
CHD2-208ENST00000626874 KRTAP5-5Q701N2 237 aaPredicted RBP1.23□□□□□ -2.21
CHD2-208ENST00000626874 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CHD2-208ENST00000626874 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
CHD2-208ENST00000626874 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
CHD2-208ENST00000626874 KRTAP5-8O75690 187 aa1.08□□□□□ -2.24
CHD2-208ENST00000626874 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
CHD2-208ENST00000626874 KRTAP5-11Q6L8G4 156 aa1.02□□□□□ -2.25
CHD2-208ENST00000626874 HMCN1Q96RW7 5635 aa1.01□□□□□ -2.25
CHD2-208ENST00000626874 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
CHD2-208ENST00000626874 KRTAP5-2Q701N4 177 aa0.99□□□□□ -2.25
CHD2-208ENST00000626874 AHNAKQ09666 5890 aaKnown RBP0.92□□□□□ -2.26
CHD2-208ENST00000626874 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
CHD2-208ENST00000626874 KRTAP5-7Q6L8G8 165 aa0.91□□□□□ -2.26
CHD2-208ENST00000626874 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
CHD2-208ENST00000626874 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.87□□□□□ -2.27
CHD2-208ENST00000626874 KRTAP5-1Q6L8H4 278 aa0.87□□□□□ -2.27
CHD2-208ENST00000626874 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 80.6 ms