RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 AHNAK2Q8IVF2 5795 aa6.64□□□□□ -1.35
ATG4B-226ENST00000625810 PRR15LQ9BU68 103 aa6.63□□□□□ -1.35
ATG4B-226ENST00000625810 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
ATG4B-226ENST00000625810 KRTAP5-10Q6L8G5 202 aa6.57□□□□□ -1.36
ATG4B-226ENST00000625810 CCDC179H3BU77 68 aa6.5□□□□□ -1.37
ATG4B-226ENST00000625810 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
ATG4B-226ENST00000625810 ATP5EP56381 51 aaPredicted RBP6.49□□□□□ -1.37
ATG4B-226ENST00000625810 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
ATG4B-226ENST00000625810 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
ATG4B-226ENST00000625810 UQCR11O14957 56 aa6.39□□□□□ -1.39
ATG4B-226ENST00000625810 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
ATG4B-226ENST00000625810 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
ATG4B-226ENST00000625810 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
ATG4B-226ENST00000625810 KRTAP5-5Q701N2 237 aaPredicted RBP6.29□□□□□ -1.4
ATG4B-226ENST00000625810 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
ATG4B-226ENST00000625810 TMEM258P61165 79 aa6.24□□□□□ -1.41
ATG4B-226ENST00000625810 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
ATG4B-226ENST00000625810 MIR22HGQ0VDD5 57 aa6.23□□□□□ -1.41
ATG4B-226ENST00000625810 K7ERS5 55 aa6.19□□□□□ -1.42
ATG4B-226ENST00000625810 KRTAP12-4P60329 112 aa6.19□□□□□ -1.42
ATG4B-226ENST00000625810 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
ATG4B-226ENST00000625810 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
ATG4B-226ENST00000625810 SYNE1Q8NF91 8797 aaKnown RBP6.05□□□□□ -1.44
ATG4B-226ENST00000625810 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
ATG4B-226ENST00000625810 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
ATG4B-226ENST00000625810 PSPHP1O15172 72 aa6□□□□□ -1.45
ATG4B-226ENST00000625810 V9GYY9 64 aa5.99□□□□□ -1.45
ATG4B-226ENST00000625810 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
ATG4B-226ENST00000625810 Q1T7F1 81 aa5.9□□□□□ -1.46
ATG4B-226ENST00000625810 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
ATG4B-226ENST00000625810 A6NED7 52 aa5.8□□□□□ -1.48
ATG4B-226ENST00000625810 KRTAP5-2Q701N4 177 aa5.8□□□□□ -1.48
ATG4B-226ENST00000625810 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
ATG4B-226ENST00000625810 MT1AP04731 61 aa5.79□□□□□ -1.48
ATG4B-226ENST00000625810 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
ATG4B-226ENST00000625810 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
ATG4B-226ENST00000625810 ROMO1P60602 79 aa5.69□□□□□ -1.5
ATG4B-226ENST00000625810 KRTAP5-8O75690 187 aa5.64□□□□□ -1.51
ATG4B-226ENST00000625810 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
ATG4B-226ENST00000625810 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
ATG4B-226ENST00000625810 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
ATG4B-226ENST00000625810 MUC5ACP98088 5654 aa5.55□□□□□ -1.52
ATG4B-226ENST00000625810 AHNAKQ09666 5890 aaKnown RBP5.52□□□□□ -1.53
ATG4B-226ENST00000625810 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
ATG4B-226ENST00000625810 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
ATG4B-226ENST00000625810 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
ATG4B-226ENST00000625810 MT3P25713 68 aa5.33□□□□□ -1.56
ATG4B-226ENST00000625810 KRTAP5-1Q6L8H4 278 aa5.25□□□□□ -1.57
ATG4B-226ENST00000625810 H3BS24 57 aa5.23□□□□□ -1.57
ATG4B-226ENST00000625810 PCP4P48539 62 aa5.08□□□□□ -1.6
ATG4B-226ENST00000625810 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
ATG4B-226ENST00000625810 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
ATG4B-226ENST00000625810 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
ATG4B-226ENST00000625810 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
ATG4B-226ENST00000625810 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
ATG4B-226ENST00000625810 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
ATG4B-226ENST00000625810 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
ATG4B-226ENST00000625810 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
ATG4B-226ENST00000625810 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
ATG4B-226ENST00000625810 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
ATG4B-226ENST00000625810 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
ATG4B-226ENST00000625810 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
ATG4B-226ENST00000625810 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
ATG4B-226ENST00000625810 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
ATG4B-226ENST00000625810 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
ATG4B-226ENST00000625810 PHGR1C9JFL3 82 aa3.83□□□□□ -1.8
ATG4B-226ENST00000625810 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
ATG4B-226ENST00000625810 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
ATG4B-226ENST00000625810 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
ATG4B-226ENST00000625810 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
ATG4B-226ENST00000625810 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
ATG4B-226ENST00000625810 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
ATG4B-226ENST00000625810 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
ATG4B-226ENST00000625810 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
ATG4B-226ENST00000625810 PRM1P04553 51 aa2.89□□□□□ -1.95
ATG4B-226ENST00000625810 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
ATG4B-226ENST00000625810 INE1O15225 51 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 63.3 ms