RNA–Protein interactions for RNA: ENST00000623163.3

SNHG5-215, Transcript of small nucleolar RNA host gene 5, human

TSL 5

Gene SNHG5, Length 851 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-215	ENST00000623163	KRTAP5-4	Q6L8H1	288 aa		5.18	□□□□□ -1.58
SNHG5-215	ENST00000623163	SPANXA2-OT1	Q8N9U9	137 aa		5.18	□□□□□ -1.58
SNHG5-215	ENST00000623163	PP632	Q6XCG6	107 aa		5.17	□□□□□ -1.58
SNHG5-215	ENST00000623163	KRTAP19-5	Q3LI72	72 aa		5.15	□□□□□ -1.59
SNHG5-215	ENST00000623163	MT1M	Q8N339	61 aa		5.15	□□□□□ -1.59
SNHG5-215	ENST00000623163	TMEM258	P61165	79 aa		5.14	□□□□□ -1.59
SNHG5-215	ENST00000623163	ATP5E	P56381	51 aa	Predicted RBP	5.13	□□□□□ -1.59
SNHG5-215	ENST00000623163		A0A0D9SG42	100 aa		5.12	□□□□□ -1.59
SNHG5-215	ENST00000623163	CHKB-CPT1B	H3BT56	60 aa		5.12	□□□□□ -1.59
SNHG5-215	ENST00000623163	MT1L	Q93083	61 aa		5.1	□□□□□ -1.59
SNHG5-215	ENST00000623163	KRTAP5-7	Q6L8G8	165 aa		5.03	□□□□□ -1.6
SNHG5-215	ENST00000623163	KRTAP5-3	Q6L8H2	238 aa		5	□□□□□ -1.61
SNHG5-215	ENST00000623163	KRTAP4-3	Q9BYR4	195 aa		5	□□□□□ -1.61
SNHG5-215	ENST00000623163	SERP1	Q9Y6X1	66 aa		4.98	□□□□□ -1.61
SNHG5-215	ENST00000623163	COA5	Q86WW8	74 aa		4.97	□□□□□ -1.61
SNHG5-215	ENST00000623163	RPS28	P62857	69 aa	Known RBP	4.95	□□□□□ -1.62
SNHG5-215	ENST00000623163	KRTAP12-1	P59990	96 aa		4.94	□□□□□ -1.62
SNHG5-215	ENST00000623163	SPATA8	Q6RVD6	105 aa		4.9	□□□□□ -1.63
SNHG5-215	ENST00000623163	SPINT4	Q6UDR6	99 aa		4.9	□□□□□ -1.63
SNHG5-215	ENST00000623163	C10orf95	Q9H7T3	257 aa		4.89	□□□□□ -1.63
SNHG5-215	ENST00000623163	LCE3A	Q5TA76	89 aa		4.86	□□□□□ -1.63
SNHG5-215	ENST00000623163	SMIM26	A0A096LP01	95 aa		4.85	□□□□□ -1.63
SNHG5-215	ENST00000623163	KRTAP20-2	Q3LI61	65 aa		4.85	□□□□□ -1.63
SNHG5-215	ENST00000623163		A0A1B0GU33	70 aa		4.84	□□□□□ -1.63
SNHG5-215	ENST00000623163	SEC61G	P60059	68 aa		4.83	□□□□□ -1.64
SNHG5-215	ENST00000623163	SPRR5	A0A1B0GTR4	108 aa		4.82	□□□□□ -1.64
SNHG5-215	ENST00000623163	LCE1F	Q5T754	118 aa		4.82	□□□□□ -1.64
SNHG5-215	ENST00000623163	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.82	□□□□□ -1.64
SNHG5-215	ENST00000623163		V9GYY9	64 aa		4.82	□□□□□ -1.64
SNHG5-215	ENST00000623163	LINC01558	Q9Y6Z2	57 aa		4.78	□□□□□ -1.64
SNHG5-215	ENST00000623163		Q1T7F1	81 aa		4.77	□□□□□ -1.65
SNHG5-215	ENST00000623163	TNP1	P09430	55 aa		4.76	□□□□□ -1.65
SNHG5-215	ENST00000623163	PRR15L	Q9BU68	103 aa		4.76	□□□□□ -1.65
SNHG5-215	ENST00000623163		A0A1B0GU69	56 aa		4.74	□□□□□ -1.65
SNHG5-215	ENST00000623163	SYNE1	Q8NF91	8797 aa	Known RBP	4.7	□□□□□ -1.66
SNHG5-215	ENST00000623163	KRTAP12-3	P60328	96 aa		4.69	□□□□□ -1.66
SNHG5-215	ENST00000623163	KRTAP12-4	P60329	112 aa		4.69	□□□□□ -1.66
SNHG5-215	ENST00000623163		A8MU10	97 aa		4.65	□□□□□ -1.67
SNHG5-215	ENST00000623163	PSPHP1	O15172	72 aa		4.65	□□□□□ -1.67
SNHG5-215	ENST00000623163	UQCR11	O14957	56 aa		4.6	□□□□□ -1.67
SNHG5-215	ENST00000623163		A6NED7	52 aa		4.54	□□□□□ -1.68
SNHG5-215	ENST00000623163	MIR22HG	Q0VDD5	57 aa		4.51	□□□□□ -1.69
SNHG5-215	ENST00000623163	KRTAP5-2	Q701N4	177 aa		4.49	□□□□□ -1.69
SNHG5-215	ENST00000623163	LCE3C	Q5T5A8	94 aa		4.45	□□□□□ -1.7
SNHG5-215	ENST00000623163	CDC42SE1	Q9NRR8	79 aa		4.45	□□□□□ -1.7
SNHG5-215	ENST00000623163	LCE1E	Q5T753	118 aa		4.41	□□□□□ -1.7
SNHG5-215	ENST00000623163	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.41	□□□□□ -1.7
SNHG5-215	ENST00000623163	AHNAK	Q09666	5890 aa	Known RBP	4.4	□□□□□ -1.7
SNHG5-215	ENST00000623163		K7ERS5	55 aa		4.4	□□□□□ -1.71
SNHG5-215	ENST00000623163	KRTAP5-8	O75690	187 aa		4.39	□□□□□ -1.71
SNHG5-215	ENST00000623163	MUC5AC	P98088	5654 aa		4.39	□□□□□ -1.71
SNHG5-215	ENST00000623163	BRK1	Q8WUW1	75 aa		4.38	□□□□□ -1.71
SNHG5-215	ENST00000623163	KRTAP25-1	Q3LHN0	102 aa		4.35	□□□□□ -1.71
SNHG5-215	ENST00000623163	MT1A	P04731	61 aa		4.33	□□□□□ -1.72
SNHG5-215	ENST00000623163	KRTAP6-1	Q3LI64	71 aa		4.31	□□□□□ -1.72
SNHG5-215	ENST00000623163	OBSCN	Q5VST9	7968 aa		4.28	□□□□□ -1.73
SNHG5-215	ENST00000623163	PRO0628	Q9UI54	55 aa		4.27	□□□□□ -1.73
SNHG5-215	ENST00000623163	PMAIP1	Q13794	54 aa		4.18	□□□□□ -1.74
SNHG5-215	ENST00000623163	KRTAP6-2	Q3LI66	62 aa		4.17	□□□□□ -1.74
SNHG5-215	ENST00000623163	ROMO1	P60602	79 aa		4.14	□□□□□ -1.75
SNHG5-215	ENST00000623163	KRTAP9-6	A8MVA2	160 aa		4.1	□□□□□ -1.75
SNHG5-215	ENST00000623163	KRTAP5-11	Q6L8G4	156 aa		4.08	□□□□□ -1.76
SNHG5-215	ENST00000623163	KRTAP5-1	Q6L8H4	278 aa		4.07	□□□□□ -1.76
SNHG5-215	ENST00000623163	LCE3E	Q5T5B0	92 aa		4.05	□□□□□ -1.76
SNHG5-215	ENST00000623163	KTN1-AS1	Q86SY8	53 aa		3.95	□□□□□ -1.78
SNHG5-215	ENST00000623163	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.78	□□□□□ -1.8
SNHG5-215	ENST00000623163	LUZP6	Q538Z0	58 aa		3.68	□□□□□ -1.82
SNHG5-215	ENST00000623163	LCE1C	Q5T751	118 aa		3.51	□□□□□ -1.85
SNHG5-215	ENST00000623163	LCE1B	Q5T7P3	118 aa		3.51	□□□□□ -1.85
SNHG5-215	ENST00000623163	LCE3D	Q9BYE3	92 aa		3.44	□□□□□ -1.86
SNHG5-215	ENST00000623163	KRTAP4-4	Q9BYR3	166 aa		3.08	□□□□□ -1.92
SNHG5-215	ENST00000623163	PHGR1	C9JFL3	82 aa		2.97	□□□□□ -1.93
SNHG5-215	ENST00000623163	KRTAP21-2	Q3LI59	83 aa		2.89	□□□□□ -1.95
SNHG5-215	ENST00000623163	INE1	O15225	51 aa		2.71	□□□□□ -1.98
SNHG5-215	ENST00000623163	MUC19	Q7Z5P9	8384 aa		2.64	□□□□□ -1.99
SNHG5-215	ENST00000623163	KRTAP21-1	Q3LI58	79 aa		2.29	□□□□□ -2.04
SNHG5-215	ENST00000623163	PRM1	P04553	51 aa		2.11	□□□□□ -2.07
SNHG5-215	ENST00000623163	MUC16	Q8WXI7	14507 aa		1.9	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms