RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 A0A1B0GU33 70 aa3.32□□□□□ -1.88
TARDBP-227ENST00000622057 MT1MQ8N339 61 aa3.32□□□□□ -1.88
TARDBP-227ENST00000622057 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
TARDBP-227ENST00000622057 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
TARDBP-227ENST00000622057 MT1LQ93083 61 aa3.29□□□□□ -1.88
TARDBP-227ENST00000622057 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
TARDBP-227ENST00000622057 COX7CP15954 63 aa3.25□□□□□ -1.89
TARDBP-227ENST00000622057 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
TARDBP-227ENST00000622057 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
TARDBP-227ENST00000622057 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
TARDBP-227ENST00000622057 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
TARDBP-227ENST00000622057 SMIM26A0A096LP01 95 aa3.22□□□□□ -1.89
TARDBP-227ENST00000622057 H7BZZ5 65 aa3.22□□□□□ -1.89
TARDBP-227ENST00000622057 A8MU10 97 aa3.21□□□□□ -1.9
TARDBP-227ENST00000622057 TNP1P09430 55 aa3.21□□□□□ -1.9
TARDBP-227ENST00000622057 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
TARDBP-227ENST00000622057 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
TARDBP-227ENST00000622057 A0A1B0GU69 56 aa3.19□□□□□ -1.9
TARDBP-227ENST00000622057 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
TARDBP-227ENST00000622057 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
TARDBP-227ENST00000622057 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
TARDBP-227ENST00000622057 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
TARDBP-227ENST00000622057 PCP4P48539 62 aa3.09□□□□□ -1.91
TARDBP-227ENST00000622057 ATP5EP56381 51 aaPredicted RBP3.08□□□□□ -1.92
TARDBP-227ENST00000622057 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
TARDBP-227ENST00000622057 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
TARDBP-227ENST00000622057 ANAPC13Q9BS18 74 aa3.06□□□□□ -1.92
TARDBP-227ENST00000622057 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
TARDBP-227ENST00000622057 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
TARDBP-227ENST00000622057 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-227ENST00000622057 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
TARDBP-227ENST00000622057 UQCR11O14957 56 aa2.99□□□□□ -1.93
TARDBP-227ENST00000622057 CCDC179H3BU77 68 aa2.96□□□□□ -1.94
TARDBP-227ENST00000622057 KRTAP25-1Q3LHN0 102 aa2.95□□□□□ -1.94
TARDBP-227ENST00000622057 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
TARDBP-227ENST00000622057 TMEM258P61165 79 aa2.93□□□□□ -1.94
TARDBP-227ENST00000622057 K7ERS5 55 aa2.89□□□□□ -1.95
TARDBP-227ENST00000622057 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
TARDBP-227ENST00000622057 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
TARDBP-227ENST00000622057 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
TARDBP-227ENST00000622057 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
TARDBP-227ENST00000622057 V9GYY9 64 aa2.83□□□□□ -1.96
TARDBP-227ENST00000622057 MT1AP04731 61 aa2.8□□□□□ -1.96
TARDBP-227ENST00000622057 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
TARDBP-227ENST00000622057 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
TARDBP-227ENST00000622057 Q1T7F1 81 aa2.78□□□□□ -1.96
TARDBP-227ENST00000622057 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
TARDBP-227ENST00000622057 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
TARDBP-227ENST00000622057 PSPHP1O15172 72 aa2.73□□□□□ -1.97
TARDBP-227ENST00000622057 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
TARDBP-227ENST00000622057 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
TARDBP-227ENST00000622057 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
TARDBP-227ENST00000622057 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
TARDBP-227ENST00000622057 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
TARDBP-227ENST00000622057 A6NED7 52 aa2.66□□□□□ -1.98
TARDBP-227ENST00000622057 RPS28P62857 69 aaKnown RBP2.66□□□□□ -1.98
TARDBP-227ENST00000622057 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
TARDBP-227ENST00000622057 ROMO1P60602 79 aa2.64□□□□□ -1.99
TARDBP-227ENST00000622057 MT3P25713 68 aa2.62□□□□□ -1.99
TARDBP-227ENST00000622057 PRAC1Q96KF2 57 aa2.56□□□□□ -2
TARDBP-227ENST00000622057 LCE1FQ5T754 118 aa2.54□□□□□ -2
TARDBP-227ENST00000622057 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
TARDBP-227ENST00000622057 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
TARDBP-227ENST00000622057 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
TARDBP-227ENST00000622057 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
TARDBP-227ENST00000622057 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
TARDBP-227ENST00000622057 PMAIP1Q13794 54 aa2.04□□□□□ -2.08
TARDBP-227ENST00000622057 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
TARDBP-227ENST00000622057 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
TARDBP-227ENST00000622057 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TARDBP-227ENST00000622057 PRO0628Q9UI54 55 aa1.81□□□□□ -2.12
TARDBP-227ENST00000622057 LUZP6Q538Z0 58 aa1.75□□□□□ -2.13
TARDBP-227ENST00000622057 KTN1-AS1Q86SY8 53 aa1.75□□□□□ -2.13
TARDBP-227ENST00000622057 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
TARDBP-227ENST00000622057 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
TARDBP-227ENST00000622057 PRM1P04553 51 aa1.33□□□□□ -2.2
TARDBP-227ENST00000622057 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
TARDBP-227ENST00000622057 INE1O15225 51 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms