RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 MT4P47944 62 aa7.74□□□□□ -1.17
TRAF4-217ENST00000618771 TMEM258P61165 79 aa7.74□□□□□ -1.17
TRAF4-217ENST00000618771 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
TRAF4-217ENST00000618771 AHNAK2Q8IVF2 5795 aa7.68□□□□□ -1.18
TRAF4-217ENST00000618771 UQCR11O14957 56 aa7.67□□□□□ -1.18
TRAF4-217ENST00000618771 KRTAP4-3Q9BYR4 195 aa7.57□□□□□ -1.2
TRAF4-217ENST00000618771 KRTAP5-10Q6L8G5 202 aa7.55□□□□□ -1.2
TRAF4-217ENST00000618771 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
TRAF4-217ENST00000618771 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
TRAF4-217ENST00000618771 KRTAP5-4Q6L8H1 288 aa7.47□□□□□ -1.21
TRAF4-217ENST00000618771 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
TRAF4-217ENST00000618771 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
TRAF4-217ENST00000618771 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
TRAF4-217ENST00000618771 K7ERS5 55 aa7.37□□□□□ -1.23
TRAF4-217ENST00000618771 V9GYY9 64 aa7.35□□□□□ -1.23
TRAF4-217ENST00000618771 PSPHP1O15172 72 aa7.33□□□□□ -1.24
TRAF4-217ENST00000618771 KRTAP5-7Q6L8G8 165 aa7.31□□□□□ -1.24
TRAF4-217ENST00000618771 Q1T7F1 81 aa7.28□□□□□ -1.24
TRAF4-217ENST00000618771 KRTAP5-3Q6L8H2 238 aa7.27□□□□□ -1.25
TRAF4-217ENST00000618771 KRTAP5-5Q701N2 237 aaPredicted RBP7.11□□□□□ -1.27
TRAF4-217ENST00000618771 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
TRAF4-217ENST00000618771 KRTAP20-2Q3LI61 65 aa7.1□□□□□ -1.27
TRAF4-217ENST00000618771 A6NED7 52 aa7.09□□□□□ -1.27
TRAF4-217ENST00000618771 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
TRAF4-217ENST00000618771 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
TRAF4-217ENST00000618771 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
TRAF4-217ENST00000618771 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
TRAF4-217ENST00000618771 CDC42SE1Q9NRR8 79 aa6.98□□□□□ -1.29
TRAF4-217ENST00000618771 KRTAP12-4P60329 112 aa6.94□□□□□ -1.3
TRAF4-217ENST00000618771 LCE3CQ5T5A8 94 aa6.92□□□□□ -1.3
TRAF4-217ENST00000618771 ROMO1P60602 79 aa6.85□□□□□ -1.31
TRAF4-217ENST00000618771 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
TRAF4-217ENST00000618771 SYNE1Q8NF91 8797 aaKnown RBP6.82□□□□□ -1.32
TRAF4-217ENST00000618771 PCP4P48539 62 aa6.67□□□□□ -1.34
TRAF4-217ENST00000618771 MT1AP04731 61 aa6.63□□□□□ -1.35
TRAF4-217ENST00000618771 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
TRAF4-217ENST00000618771 KRTAP6-1Q3LI64 71 aa6.59□□□□□ -1.35
TRAF4-217ENST00000618771 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
TRAF4-217ENST00000618771 KRTAP5-2Q701N4 177 aa6.49□□□□□ -1.37
TRAF4-217ENST00000618771 AHNAKQ09666 5890 aaKnown RBP6.43□□□□□ -1.38
TRAF4-217ENST00000618771 MUC5BQ9HC84 5762 aaPredicted RBP6.4□□□□□ -1.38
TRAF4-217ENST00000618771 KRTAP9-4Q9BYQ2 154 aa6.4□□□□□ -1.38
TRAF4-217ENST00000618771 MUC5ACP98088 5654 aa6.39□□□□□ -1.39
TRAF4-217ENST00000618771 KRTAP5-8O75690 187 aa6.39□□□□□ -1.39
TRAF4-217ENST00000618771 KRTAP6-2Q3LI66 62 aa6.3□□□□□ -1.4
TRAF4-217ENST00000618771 OBSCNQ5VST9 7968 aa6.26□□□□□ -1.41
TRAF4-217ENST00000618771 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
TRAF4-217ENST00000618771 MT3P25713 68 aa6.05□□□□□ -1.44
TRAF4-217ENST00000618771 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
TRAF4-217ENST00000618771 KRTAP5-1Q6L8H4 278 aa5.89□□□□□ -1.47
TRAF4-217ENST00000618771 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
TRAF4-217ENST00000618771 LCE1EQ5T753 118 aa5.57□□□□□ -1.52
TRAF4-217ENST00000618771 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
TRAF4-217ENST00000618771 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
TRAF4-217ENST00000618771 LCE1BQ5T7P3 118 aa5.25□□□□□ -1.57
TRAF4-217ENST00000618771 LCE1CQ5T751 118 aa5.16□□□□□ -1.58
TRAF4-217ENST00000618771 PRO0628Q9UI54 55 aa5.11□□□□□ -1.59
TRAF4-217ENST00000618771 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
TRAF4-217ENST00000618771 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
TRAF4-217ENST00000618771 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
TRAF4-217ENST00000618771 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
TRAF4-217ENST00000618771 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
TRAF4-217ENST00000618771 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
TRAF4-217ENST00000618771 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
TRAF4-217ENST00000618771 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
TRAF4-217ENST00000618771 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
TRAF4-217ENST00000618771 PHGR1C9JFL3 82 aa4.43□□□□□ -1.7
TRAF4-217ENST00000618771 KRTAP21-2Q3LI59 83 aa4.33□□□□□ -1.72
TRAF4-217ENST00000618771 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
TRAF4-217ENST00000618771 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
TRAF4-217ENST00000618771 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
TRAF4-217ENST00000618771 PRM1P04553 51 aa3.51□□□□□ -1.85
TRAF4-217ENST00000618771 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
TRAF4-217ENST00000618771 H3BS24 57 aa3.03□□□□□ -1.92
TRAF4-217ENST00000618771 INE1O15225 51 aa2.84□□□□□ -1.95
TRAF4-217ENST00000618771 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
TRAF4-217ENST00000618771 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms