RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
TVP23A-210ENST00000612195 KRTAP4-6Q9BYQ5 205 aa5.86□□□□□ -1.47
TVP23A-210ENST00000612195 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
TVP23A-210ENST00000612195 LINC01558Q9Y6Z2 57 aa5.85□□□□□ -1.47
TVP23A-210ENST00000612195 PCP4P48539 62 aa5.83□□□□□ -1.48
TVP23A-210ENST00000612195 SMIM26A0A096LP01 95 aa5.78□□□□□ -1.48
TVP23A-210ENST00000612195 V9GYY9 64 aa5.78□□□□□ -1.48
TVP23A-210ENST00000612195 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
TVP23A-210ENST00000612195 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
TVP23A-210ENST00000612195 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
TVP23A-210ENST00000612195 UQCR11O14957 56 aa5.69□□□□□ -1.5
TVP23A-210ENST00000612195 KRTAP5-7Q6L8G8 165 aa5.69□□□□□ -1.5
TVP23A-210ENST00000612195 Q1T7F1 81 aa5.68□□□□□ -1.5
TVP23A-210ENST00000612195 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
TVP23A-210ENST00000612195 TNP1P09430 55 aa5.65□□□□□ -1.5
TVP23A-210ENST00000612195 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
TVP23A-210ENST00000612195 A8MU10 97 aa5.63□□□□□ -1.51
TVP23A-210ENST00000612195 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
TVP23A-210ENST00000612195 PSPHP1O15172 72 aa5.55□□□□□ -1.52
TVP23A-210ENST00000612195 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
TVP23A-210ENST00000612195 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
TVP23A-210ENST00000612195 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
TVP23A-210ENST00000612195 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
TVP23A-210ENST00000612195 K7ERS5 55 aa5.49□□□□□ -1.53
TVP23A-210ENST00000612195 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
TVP23A-210ENST00000612195 A6NED7 52 aa5.43□□□□□ -1.54
TVP23A-210ENST00000612195 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
TVP23A-210ENST00000612195 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
TVP23A-210ENST00000612195 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
TVP23A-210ENST00000612195 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
TVP23A-210ENST00000612195 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
TVP23A-210ENST00000612195 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
TVP23A-210ENST00000612195 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
TVP23A-210ENST00000612195 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
TVP23A-210ENST00000612195 AHNAKQ09666 5890 aaKnown RBP5.09□□□□□ -1.59
TVP23A-210ENST00000612195 ROMO1P60602 79 aa5.08□□□□□ -1.6
TVP23A-210ENST00000612195 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
TVP23A-210ENST00000612195 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
TVP23A-210ENST00000612195 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
TVP23A-210ENST00000612195 MUC5ACP98088 5654 aa5.03□□□□□ -1.6
TVP23A-210ENST00000612195 MT1AP04731 61 aa5.02□□□□□ -1.61
TVP23A-210ENST00000612195 MUC5BQ9HC84 5762 aaPredicted RBP5.01□□□□□ -1.61
TVP23A-210ENST00000612195 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
TVP23A-210ENST00000612195 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
TVP23A-210ENST00000612195 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
TVP23A-210ENST00000612195 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
TVP23A-210ENST00000612195 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
TVP23A-210ENST00000612195 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
TVP23A-210ENST00000612195 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
TVP23A-210ENST00000612195 H3BS24 57 aa4.81□□□□□ -1.64
TVP23A-210ENST00000612195 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
TVP23A-210ENST00000612195 PMAIP1Q13794 54 aa4.75□□□□□ -1.65
TVP23A-210ENST00000612195 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
TVP23A-210ENST00000612195 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
TVP23A-210ENST00000612195 MT3P25713 68 aa4.61□□□□□ -1.67
TVP23A-210ENST00000612195 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
TVP23A-210ENST00000612195 PRAC1Q96KF2 57 aa4.36□□□□□ -1.71
TVP23A-210ENST00000612195 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
TVP23A-210ENST00000612195 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
TVP23A-210ENST00000612195 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
TVP23A-210ENST00000612195 LCE1CQ5T751 118 aa4□□□□□ -1.77
TVP23A-210ENST00000612195 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
TVP23A-210ENST00000612195 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
TVP23A-210ENST00000612195 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
TVP23A-210ENST00000612195 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
TVP23A-210ENST00000612195 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
TVP23A-210ENST00000612195 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
TVP23A-210ENST00000612195 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
TVP23A-210ENST00000612195 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
TVP23A-210ENST00000612195 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
TVP23A-210ENST00000612195 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
TVP23A-210ENST00000612195 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
TVP23A-210ENST00000612195 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
TVP23A-210ENST00000612195 INE1O15225 51 aa2.89□□□□□ -1.95
TVP23A-210ENST00000612195 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
TVP23A-210ENST00000612195 PRM1P04553 51 aa2.56□□□□□ -2
TVP23A-210ENST00000612195 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms