RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
ABCA13-208ENST00000611776 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
ABCA13-208ENST00000611776 KRTAP19-4Q3LI73 84 aa2.44□□□□□ -2.02
ABCA13-208ENST00000611776 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
ABCA13-208ENST00000611776 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
ABCA13-208ENST00000611776 LCE4AQ5TA78 99 aa2.42□□□□□ -2.02
ABCA13-208ENST00000611776 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
ABCA13-208ENST00000611776 KRTAP9-8Q9BYQ0 159 aa2.41□□□□□ -2.02
ABCA13-208ENST00000611776 KRTAP9-3Q9BYQ3 159 aa2.39□□□□□ -2.03
ABCA13-208ENST00000611776 KRTAP19-3Q7Z4W3 81 aa2.35□□□□□ -2.03
ABCA13-208ENST00000611776 MT1XP80297 61 aa2.35□□□□□ -2.03
ABCA13-208ENST00000611776 MUC17Q685J3 4493 aa2.35□□□□□ -2.03
ABCA13-208ENST00000611776 LCE2AQ5TA79 106 aaPredicted RBP2.33□□□□□ -2.04
ABCA13-208ENST00000611776 LOC100996750A0A140TA64 210 aa2.33□□□□□ -2.04
ABCA13-208ENST00000611776 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
ABCA13-208ENST00000611776 MT1BP07438 61 aa2.31□□□□□ -2.04
ABCA13-208ENST00000611776 HERC1Q15751 4861 aa2.31□□□□□ -2.04
ABCA13-208ENST00000611776 MT3P25713 68 aa2.3□□□□□ -2.04
ABCA13-208ENST00000611776 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
ABCA13-208ENST00000611776 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
ABCA13-208ENST00000611776 MUC2Q02817 5179 aa2.28□□□□□ -2.04
ABCA13-208ENST00000611776 RYR2Q92736 4967 aa2.25□□□□□ -2.05
ABCA13-208ENST00000611776 KRTAP19-2Q3LHN2 52 aa2.21□□□□□ -2.06
ABCA13-208ENST00000611776 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
ABCA13-208ENST00000611776 HMCN2Q8NDA2 5059 aa2.17□□□□□ -2.06
ABCA13-208ENST00000611776 UBR4Q5T4S7 5183 aa2.17□□□□□ -2.06
ABCA13-208ENST00000611776 ABCA13Q86UQ4 5058 aa2.16□□□□□ -2.06
ABCA13-208ENST00000611776 PRM1P04553 51 aa2.16□□□□□ -2.06
ABCA13-208ENST00000611776 MT1MQ8N339 61 aa2.16□□□□□ -2.06
ABCA13-208ENST00000611776 NEBP20929 6669 aa2.14□□□□□ -2.07
ABCA13-208ENST00000611776 MT1EP04732 61 aa2.13□□□□□ -2.07
ABCA13-208ENST00000611776 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
ABCA13-208ENST00000611776 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
ABCA13-208ENST00000611776 MT1LQ93083 61 aa2.1□□□□□ -2.07
ABCA13-208ENST00000611776 KMT2DO14686 5537 aa2.1□□□□□ -2.07
ABCA13-208ENST00000611776 FAT4Q6V0I7 4981 aa2.09□□□□□ -2.08
ABCA13-208ENST00000611776 KRTAP20-2Q3LI61 65 aa2.01□□□□□ -2.09
ABCA13-208ENST00000611776 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
ABCA13-208ENST00000611776 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
ABCA13-208ENST00000611776 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
ABCA13-208ENST00000611776 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
ABCA13-208ENST00000611776 KRTAP4-6Q9BYQ5 205 aa1.94□□□□□ -2.1
ABCA13-208ENST00000611776 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
ABCA13-208ENST00000611776 SYNE1Q8NF91 8797 aaKnown RBP1.92□□□□□ -2.1
ABCA13-208ENST00000611776 MT1AP04731 61 aa1.92□□□□□ -2.1
ABCA13-208ENST00000611776 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
ABCA13-208ENST00000611776 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
ABCA13-208ENST00000611776 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.11
ABCA13-208ENST00000611776 USH2AO75445 5202 aa1.84□□□□□ -2.11
ABCA13-208ENST00000611776 KRTAP9-4Q9BYQ2 154 aa1.84□□□□□ -2.12
ABCA13-208ENST00000611776 KRTAP6-1Q3LI64 71 aa1.83□□□□□ -2.12
ABCA13-208ENST00000611776 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
ABCA13-208ENST00000611776 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
ABCA13-208ENST00000611776 SSPOA2VEC9 5147 aa1.69□□□□□ -2.14
ABCA13-208ENST00000611776 KRTAP4-11Q9BYQ6 195 aa1.69□□□□□ -2.14
ABCA13-208ENST00000611776 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
ABCA13-208ENST00000611776 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
ABCA13-208ENST00000611776 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
ABCA13-208ENST00000611776 KRTAP5-3Q6L8H2 238 aa1.67□□□□□ -2.14
ABCA13-208ENST00000611776 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
ABCA13-208ENST00000611776 KRTAP5-4Q6L8H1 288 aa1.59□□□□□ -2.15
ABCA13-208ENST00000611776 KRTAP5-5Q701N2 237 aaPredicted RBP1.59□□□□□ -2.15
ABCA13-208ENST00000611776 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
ABCA13-208ENST00000611776 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
ABCA13-208ENST00000611776 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.18
ABCA13-208ENST00000611776 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.2
ABCA13-208ENST00000611776 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
ABCA13-208ENST00000611776 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
ABCA13-208ENST00000611776 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
ABCA13-208ENST00000611776 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
ABCA13-208ENST00000611776 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
ABCA13-208ENST00000611776 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
ABCA13-208ENST00000611776 KRTAP5-2Q701N4 177 aa1.06□□□□□ -2.24
ABCA13-208ENST00000611776 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
ABCA13-208ENST00000611776 KRTAP5-1Q6L8H4 278 aa0.98□□□□□ -2.25
ABCA13-208ENST00000611776 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.93□□□□□ -2.26
ABCA13-208ENST00000611776 KRTAP5-11Q6L8G4 156 aa0.88□□□□□ -2.27
ABCA13-208ENST00000611776 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms