RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
SRSF4-206ENST00000605204 MT1GP13640 62 aa6.95□□□□□ -1.3
SRSF4-206ENST00000605204 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
SRSF4-206ENST00000605204 PSPHP1O15172 72 aa6.93□□□□□ -1.3
SRSF4-206ENST00000605204 MT1LQ93083 61 aa6.85□□□□□ -1.31
SRSF4-206ENST00000605204 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
SRSF4-206ENST00000605204 HMCN1Q96RW7 5635 aa6.8□□□□□ -1.32
SRSF4-206ENST00000605204 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
SRSF4-206ENST00000605204 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
SRSF4-206ENST00000605204 MT1MQ8N339 61 aa6.78□□□□□ -1.32
SRSF4-206ENST00000605204 A6NED7 52 aa6.76□□□□□ -1.33
SRSF4-206ENST00000605204 AHNAK2Q8IVF2 5795 aa6.75□□□□□ -1.33
SRSF4-206ENST00000605204 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
SRSF4-206ENST00000605204 PCP4P48539 62 aa6.72□□□□□ -1.33
SRSF4-206ENST00000605204 MT4P47944 62 aa6.66□□□□□ -1.34
SRSF4-206ENST00000605204 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
SRSF4-206ENST00000605204 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
SRSF4-206ENST00000605204 CDC42SE1Q9NRR8 79 aa6.57□□□□□ -1.36
SRSF4-206ENST00000605204 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
SRSF4-206ENST00000605204 KRTAP5-10Q6L8G5 202 aa6.52□□□□□ -1.37
SRSF4-206ENST00000605204 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
SRSF4-206ENST00000605204 KRTAP5-4Q6L8H1 288 aa6.47□□□□□ -1.37
SRSF4-206ENST00000605204 ROMO1P60602 79 aa6.44□□□□□ -1.38
SRSF4-206ENST00000605204 KRTAP4-6Q9BYQ5 205 aa6.44□□□□□ -1.38
SRSF4-206ENST00000605204 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
SRSF4-206ENST00000605204 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
SRSF4-206ENST00000605204 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
SRSF4-206ENST00000605204 KRTAP5-7Q6L8G8 165 aa6.29□□□□□ -1.4
SRSF4-206ENST00000605204 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
SRSF4-206ENST00000605204 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
SRSF4-206ENST00000605204 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.41
SRSF4-206ENST00000605204 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
SRSF4-206ENST00000605204 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
SRSF4-206ENST00000605204 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
SRSF4-206ENST00000605204 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
SRSF4-206ENST00000605204 BRK1Q8WUW1 75 aa5.93□□□□□ -1.46
SRSF4-206ENST00000605204 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
SRSF4-206ENST00000605204 MT1AP04731 61 aa5.86□□□□□ -1.47
SRSF4-206ENST00000605204 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
SRSF4-206ENST00000605204 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
SRSF4-206ENST00000605204 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
SRSF4-206ENST00000605204 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
SRSF4-206ENST00000605204 KRTAP5-2Q701N4 177 aa5.65□□□□□ -1.51
SRSF4-206ENST00000605204 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
SRSF4-206ENST00000605204 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
SRSF4-206ENST00000605204 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
SRSF4-206ENST00000605204 MUC5ACP98088 5654 aa5.58□□□□□ -1.52
SRSF4-206ENST00000605204 MUC5BQ9HC84 5762 aaPredicted RBP5.57□□□□□ -1.52
SRSF4-206ENST00000605204 KRTAP5-8O75690 187 aa5.53□□□□□ -1.52
SRSF4-206ENST00000605204 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
SRSF4-206ENST00000605204 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
SRSF4-206ENST00000605204 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
SRSF4-206ENST00000605204 MT3P25713 68 aa5.38□□□□□ -1.55
SRSF4-206ENST00000605204 H3BS24 57 aa5.37□□□□□ -1.55
SRSF4-206ENST00000605204 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
SRSF4-206ENST00000605204 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
SRSF4-206ENST00000605204 KRTAP5-1Q6L8H4 278 aa5.11□□□□□ -1.59
SRSF4-206ENST00000605204 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
SRSF4-206ENST00000605204 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
SRSF4-206ENST00000605204 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
SRSF4-206ENST00000605204 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
SRSF4-206ENST00000605204 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
SRSF4-206ENST00000605204 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
SRSF4-206ENST00000605204 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.69
SRSF4-206ENST00000605204 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
SRSF4-206ENST00000605204 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
SRSF4-206ENST00000605204 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
SRSF4-206ENST00000605204 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
SRSF4-206ENST00000605204 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
SRSF4-206ENST00000605204 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
SRSF4-206ENST00000605204 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
SRSF4-206ENST00000605204 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
SRSF4-206ENST00000605204 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
SRSF4-206ENST00000605204 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
SRSF4-206ENST00000605204 INE1O15225 51 aa3.29□□□□□ -1.88
SRSF4-206ENST00000605204 PRM1P04553 51 aa3.25□□□□□ -1.89
SRSF4-206ENST00000605204 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
SRSF4-206ENST00000605204 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 62.2 ms