RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
UBE2E3-213ENST00000602959 MT1MQ8N339 61 aa8.57□□□□□ -1.04
UBE2E3-213ENST00000602959 K7ERS5 55 aa8.55□□□□□ -1.04
UBE2E3-213ENST00000602959 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
UBE2E3-213ENST00000602959 KRTAP12-3P60328 96 aa8.45□□□□□ -1.06
UBE2E3-213ENST00000602959 A6NED7 52 aa8.38□□□□□ -1.07
UBE2E3-213ENST00000602959 PCP4P48539 62 aa8.37□□□□□ -1.07
UBE2E3-213ENST00000602959 RPS28P62857 69 aaKnown RBP8.37□□□□□ -1.07
UBE2E3-213ENST00000602959 KRTAP4-3Q9BYR4 195 aa8.32□□□□□ -1.08
UBE2E3-213ENST00000602959 KRTAP4-9Q9BYQ8 210 aa8.27□□□□□ -1.09
UBE2E3-213ENST00000602959 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
UBE2E3-213ENST00000602959 LCE4AQ5TA78 99 aa8.19□□□□□ -1.1
UBE2E3-213ENST00000602959 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
UBE2E3-213ENST00000602959 LCE1DQ5T752 114 aa8.13□□□□□ -1.11
UBE2E3-213ENST00000602959 CDC42SE1Q9NRR8 79 aa8.13□□□□□ -1.11
UBE2E3-213ENST00000602959 KRTAP5-4Q6L8H1 288 aa8.09□□□□□ -1.11
UBE2E3-213ENST00000602959 HMCN1Q96RW7 5635 aa8.04□□□□□ -1.12
UBE2E3-213ENST00000602959 MT4P47944 62 aa8.03□□□□□ -1.12
UBE2E3-213ENST00000602959 KRTAP19-4Q3LI73 84 aa8.03□□□□□ -1.12
UBE2E3-213ENST00000602959 ROMO1P60602 79 aa8.01□□□□□ -1.13
UBE2E3-213ENST00000602959 GPR98Q8WXG9 6306 aa7.95□□□□□ -1.14
UBE2E3-213ENST00000602959 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
UBE2E3-213ENST00000602959 KRTAP5-5Q701N2 237 aaPredicted RBP7.87□□□□□ -1.15
UBE2E3-213ENST00000602959 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
UBE2E3-213ENST00000602959 LCE3CQ5T5A8 94 aa7.8□□□□□ -1.16
UBE2E3-213ENST00000602959 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
UBE2E3-213ENST00000602959 AHNAK2Q8IVF2 5795 aa7.69□□□□□ -1.18
UBE2E3-213ENST00000602959 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
UBE2E3-213ENST00000602959 H3BS24 57 aa7.61□□□□□ -1.19
UBE2E3-213ENST00000602959 KRTAP20-2Q3LI61 65 aa7.6□□□□□ -1.19
UBE2E3-213ENST00000602959 KRTAP12-4P60329 112 aa7.58□□□□□ -1.2
UBE2E3-213ENST00000602959 SYNE1Q8NF91 8797 aaKnown RBP7.57□□□□□ -1.2
UBE2E3-213ENST00000602959 KRTAP5-10Q6L8G5 202 aa7.48□□□□□ -1.21
UBE2E3-213ENST00000602959 KRTAP5-3Q6L8H2 238 aa7.39□□□□□ -1.23
UBE2E3-213ENST00000602959 KRTAP9-6A8MVA2 160 aa7.37□□□□□ -1.23
UBE2E3-213ENST00000602959 MT1AP04731 61 aa7.36□□□□□ -1.23
UBE2E3-213ENST00000602959 BRK1Q8WUW1 75 aa7.34□□□□□ -1.23
UBE2E3-213ENST00000602959 KRTAP6-1Q3LI64 71 aa7.29□□□□□ -1.24
UBE2E3-213ENST00000602959 KRTAP5-7Q6L8G8 165 aa7.17□□□□□ -1.26
UBE2E3-213ENST00000602959 KRTAP5-2Q701N4 177 aa7.13□□□□□ -1.27
UBE2E3-213ENST00000602959 KRTAP9-4Q9BYQ2 154 aa7.08□□□□□ -1.28
UBE2E3-213ENST00000602959 KRTAP6-2Q3LI66 62 aa6.93□□□□□ -1.3
UBE2E3-213ENST00000602959 PMAIP1Q13794 54 aa6.9□□□□□ -1.3
UBE2E3-213ENST00000602959 KRTAP4-11Q9BYQ6 195 aa6.89□□□□□ -1.31
UBE2E3-213ENST00000602959 MT3P25713 68 aa6.71□□□□□ -1.34
UBE2E3-213ENST00000602959 KRTAP5-8O75690 187 aa6.67□□□□□ -1.34
UBE2E3-213ENST00000602959 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
UBE2E3-213ENST00000602959 OBSCNQ5VST9 7968 aa6.59□□□□□ -1.35
UBE2E3-213ENST00000602959 SVIPQ8NHG7 77 aa6.52□□□□□ -1.37
UBE2E3-213ENST00000602959 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
UBE2E3-213ENST00000602959 KRTAP5-1Q6L8H4 278 aa6.35□□□□□ -1.39
UBE2E3-213ENST00000602959 MUC5BQ9HC84 5762 aaPredicted RBP6.31□□□□□ -1.4
UBE2E3-213ENST00000602959 MUC5ACP98088 5654 aa6.29□□□□□ -1.4
UBE2E3-213ENST00000602959 AHNAKQ09666 5890 aaKnown RBP6.28□□□□□ -1.4
UBE2E3-213ENST00000602959 KRTAP9-9Q9BYP9 154 aa6.27□□□□□ -1.41
UBE2E3-213ENST00000602959 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
UBE2E3-213ENST00000602959 KTN1-AS1Q86SY8 53 aa6.21□□□□□ -1.42
UBE2E3-213ENST00000602959 LCE1EQ5T753 118 aa6.15□□□□□ -1.42
UBE2E3-213ENST00000602959 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
UBE2E3-213ENST00000602959 LCE1BQ5T7P3 118 aa5.72□□□□□ -1.49
UBE2E3-213ENST00000602959 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
UBE2E3-213ENST00000602959 LCE3DQ9BYE3 92 aa5.65□□□□□ -1.5
UBE2E3-213ENST00000602959 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
UBE2E3-213ENST00000602959 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
UBE2E3-213ENST00000602959 LCE3EQ5T5B0 92 aa5.34□□□□□ -1.55
UBE2E3-213ENST00000602959 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
UBE2E3-213ENST00000602959 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
UBE2E3-213ENST00000602959 LCE1FQ5T754 118 aa4.97□□□□□ -1.61
UBE2E3-213ENST00000602959 KRTAP21-2Q3LI59 83 aa4.82□□□□□ -1.64
UBE2E3-213ENST00000602959 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
UBE2E3-213ENST00000602959 PHGR1C9JFL3 82 aa4.44□□□□□ -1.7
UBE2E3-213ENST00000602959 KRTAP4-4Q9BYR3 166 aa4.34□□□□□ -1.71
UBE2E3-213ENST00000602959 PRM1P04553 51 aa4.09□□□□□ -1.75
UBE2E3-213ENST00000602959 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.76
UBE2E3-213ENST00000602959 INE1O15225 51 aa3.69□□□□□ -1.82
UBE2E3-213ENST00000602959 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
UBE2E3-213ENST00000602959 MUC16Q8WXI7 14507 aa2.95□□□□□ -1.94
Retrieved 77 of 20,778 RNA–protein pairs in 200 ms