RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 K7ERS5 55 aa5.96□□□□□ -1.46
SSBP4-213ENST00000602088 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
SSBP4-213ENST00000602088 PCP4P48539 62 aa5.93□□□□□ -1.46
SSBP4-213ENST00000602088 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
SSBP4-213ENST00000602088 MT1MQ8N339 61 aa5.91□□□□□ -1.46
SSBP4-213ENST00000602088 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
SSBP4-213ENST00000602088 A6NED7 52 aa5.87□□□□□ -1.47
SSBP4-213ENST00000602088 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
SSBP4-213ENST00000602088 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.48
SSBP4-213ENST00000602088 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
SSBP4-213ENST00000602088 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
SSBP4-213ENST00000602088 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
SSBP4-213ENST00000602088 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
SSBP4-213ENST00000602088 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
SSBP4-213ENST00000602088 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
SSBP4-213ENST00000602088 GPR98Q8WXG9 6306 aa5.63□□□□□ -1.51
SSBP4-213ENST00000602088 ROMO1P60602 79 aa5.6□□□□□ -1.51
SSBP4-213ENST00000602088 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
SSBP4-213ENST00000602088 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
SSBP4-213ENST00000602088 KRTAP5-4Q6L8H1 288 aa5.56□□□□□ -1.52
SSBP4-213ENST00000602088 MT4P47944 62 aa5.52□□□□□ -1.53
SSBP4-213ENST00000602088 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
SSBP4-213ENST00000602088 HMCN1Q96RW7 5635 aa5.48□□□□□ -1.53
SSBP4-213ENST00000602088 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
SSBP4-213ENST00000602088 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
SSBP4-213ENST00000602088 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
SSBP4-213ENST00000602088 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
SSBP4-213ENST00000602088 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
SSBP4-213ENST00000602088 KRTAP20-2Q3LI61 65 aa5.23□□□□□ -1.57
SSBP4-213ENST00000602088 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
SSBP4-213ENST00000602088 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
SSBP4-213ENST00000602088 AHNAK2Q8IVF2 5795 aa5.16□□□□□ -1.58
SSBP4-213ENST00000602088 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
SSBP4-213ENST00000602088 KRTAP5-10Q6L8G5 202 aa5.11□□□□□ -1.59
SSBP4-213ENST00000602088 MT1AP04731 61 aa5.08□□□□□ -1.6
SSBP4-213ENST00000602088 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
SSBP4-213ENST00000602088 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
SSBP4-213ENST00000602088 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
SSBP4-213ENST00000602088 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
SSBP4-213ENST00000602088 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
SSBP4-213ENST00000602088 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
SSBP4-213ENST00000602088 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
SSBP4-213ENST00000602088 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
SSBP4-213ENST00000602088 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
SSBP4-213ENST00000602088 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
SSBP4-213ENST00000602088 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
SSBP4-213ENST00000602088 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
SSBP4-213ENST00000602088 MT3P25713 68 aa4.64□□□□□ -1.67
SSBP4-213ENST00000602088 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
SSBP4-213ENST00000602088 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
SSBP4-213ENST00000602088 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
SSBP4-213ENST00000602088 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
SSBP4-213ENST00000602088 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
SSBP4-213ENST00000602088 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
SSBP4-213ENST00000602088 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
SSBP4-213ENST00000602088 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
SSBP4-213ENST00000602088 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
SSBP4-213ENST00000602088 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
SSBP4-213ENST00000602088 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SSBP4-213ENST00000602088 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
SSBP4-213ENST00000602088 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
SSBP4-213ENST00000602088 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
SSBP4-213ENST00000602088 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
SSBP4-213ENST00000602088 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
SSBP4-213ENST00000602088 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
SSBP4-213ENST00000602088 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
SSBP4-213ENST00000602088 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
SSBP4-213ENST00000602088 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
SSBP4-213ENST00000602088 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
SSBP4-213ENST00000602088 H3BS24 57 aa3.19□□□□□ -1.9
SSBP4-213ENST00000602088 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
SSBP4-213ENST00000602088 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
SSBP4-213ENST00000602088 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
SSBP4-213ENST00000602088 INE1O15225 51 aa2.94□□□□□ -1.94
SSBP4-213ENST00000602088 PRM1P04553 51 aa2.86□□□□□ -1.95
SSBP4-213ENST00000602088 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
SSBP4-213ENST00000602088 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SSBP4-213ENST00000602088 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 8.8 ms