RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TNP1P09430 55 aa6.1□□□□□ -1.43
CHMP2A-208ENST00000601220 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
CHMP2A-208ENST00000601220 H7BZZ5 65 aa6.07□□□□□ -1.44
CHMP2A-208ENST00000601220 KRTAP5-7Q6L8G8 165 aa6.04□□□□□ -1.44
CHMP2A-208ENST00000601220 A0A1B0GU69 56 aa6.03□□□□□ -1.44
CHMP2A-208ENST00000601220 CCDC179H3BU77 68 aa6.03□□□□□ -1.44
CHMP2A-208ENST00000601220 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
CHMP2A-208ENST00000601220 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
CHMP2A-208ENST00000601220 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
CHMP2A-208ENST00000601220 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
CHMP2A-208ENST00000601220 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
CHMP2A-208ENST00000601220 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
CHMP2A-208ENST00000601220 TMEM258P61165 79 aa5.82□□□□□ -1.48
CHMP2A-208ENST00000601220 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
CHMP2A-208ENST00000601220 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
CHMP2A-208ENST00000601220 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
CHMP2A-208ENST00000601220 PCP4P48539 62 aa5.77□□□□□ -1.49
CHMP2A-208ENST00000601220 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
CHMP2A-208ENST00000601220 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
CHMP2A-208ENST00000601220 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
CHMP2A-208ENST00000601220 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
CHMP2A-208ENST00000601220 UQCR11O14957 56 aa5.57□□□□□ -1.52
CHMP2A-208ENST00000601220 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
CHMP2A-208ENST00000601220 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
CHMP2A-208ENST00000601220 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
CHMP2A-208ENST00000601220 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
CHMP2A-208ENST00000601220 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
CHMP2A-208ENST00000601220 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
CHMP2A-208ENST00000601220 MT1AP04731 61 aa5.42□□□□□ -1.54
CHMP2A-208ENST00000601220 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
CHMP2A-208ENST00000601220 Q1T7F1 81 aa5.42□□□□□ -1.54
CHMP2A-208ENST00000601220 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
CHMP2A-208ENST00000601220 V9GYY9 64 aa5.41□□□□□ -1.54
CHMP2A-208ENST00000601220 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
CHMP2A-208ENST00000601220 PSPHP1O15172 72 aa5.32□□□□□ -1.56
CHMP2A-208ENST00000601220 AHNAKQ09666 5890 aaKnown RBP5.3□□□□□ -1.56
CHMP2A-208ENST00000601220 K7ERS5 55 aa5.3□□□□□ -1.56
CHMP2A-208ENST00000601220 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
CHMP2A-208ENST00000601220 MUC5BQ9HC84 5762 aaPredicted RBP5.28□□□□□ -1.56
CHMP2A-208ENST00000601220 MUC5ACP98088 5654 aa5.27□□□□□ -1.57
CHMP2A-208ENST00000601220 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
CHMP2A-208ENST00000601220 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
CHMP2A-208ENST00000601220 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
CHMP2A-208ENST00000601220 A6NED7 52 aa5.15□□□□□ -1.59
CHMP2A-208ENST00000601220 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
CHMP2A-208ENST00000601220 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
CHMP2A-208ENST00000601220 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
CHMP2A-208ENST00000601220 ROMO1P60602 79 aa4.96□□□□□ -1.62
CHMP2A-208ENST00000601220 MT3P25713 68 aa4.95□□□□□ -1.62
CHMP2A-208ENST00000601220 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
CHMP2A-208ENST00000601220 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
CHMP2A-208ENST00000601220 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
CHMP2A-208ENST00000601220 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
CHMP2A-208ENST00000601220 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
CHMP2A-208ENST00000601220 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
CHMP2A-208ENST00000601220 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
CHMP2A-208ENST00000601220 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
CHMP2A-208ENST00000601220 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
CHMP2A-208ENST00000601220 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
CHMP2A-208ENST00000601220 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
CHMP2A-208ENST00000601220 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
CHMP2A-208ENST00000601220 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
CHMP2A-208ENST00000601220 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
CHMP2A-208ENST00000601220 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
CHMP2A-208ENST00000601220 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
CHMP2A-208ENST00000601220 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
CHMP2A-208ENST00000601220 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
CHMP2A-208ENST00000601220 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
CHMP2A-208ENST00000601220 H3BS24 57 aa3.49□□□□□ -1.85
CHMP2A-208ENST00000601220 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
CHMP2A-208ENST00000601220 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
CHMP2A-208ENST00000601220 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
CHMP2A-208ENST00000601220 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CHMP2A-208ENST00000601220 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
CHMP2A-208ENST00000601220 INE1O15225 51 aa2.67□□□□□ -1.98
CHMP2A-208ENST00000601220 PRM1P04553 51 aa2.52□□□□□ -2.01
CHMP2A-208ENST00000601220 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms