RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 KRTAP19-3Q7Z4W3 81 aa6.71□□□□□ -1.34
SSBP4-207ENST00000600244 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
SSBP4-207ENST00000600244 PSPHP1O15172 72 aa6.7□□□□□ -1.34
SSBP4-207ENST00000600244 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
SSBP4-207ENST00000600244 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
SSBP4-207ENST00000600244 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
SSBP4-207ENST00000600244 KRTAP5-4Q6L8H1 288 aa6.62□□□□□ -1.35
SSBP4-207ENST00000600244 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
SSBP4-207ENST00000600244 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
SSBP4-207ENST00000600244 MT1EP04732 61 aa6.58□□□□□ -1.36
SSBP4-207ENST00000600244 A6NED7 52 aa6.48□□□□□ -1.37
SSBP4-207ENST00000600244 MT1GP13640 62 aa6.45□□□□□ -1.38
SSBP4-207ENST00000600244 C10orf95Q9H7T3 257 aa6.4□□□□□ -1.38
SSBP4-207ENST00000600244 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
SSBP4-207ENST00000600244 K7ERS5 55 aa6.33□□□□□ -1.4
SSBP4-207ENST00000600244 MT1MQ8N339 61 aa6.33□□□□□ -1.4
SSBP4-207ENST00000600244 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
SSBP4-207ENST00000600244 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
SSBP4-207ENST00000600244 TNP1P09430 55 aa6.24□□□□□ -1.41
SSBP4-207ENST00000600244 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
SSBP4-207ENST00000600244 AHNAKQ09666 5890 aaKnown RBP6.19□□□□□ -1.42
SSBP4-207ENST00000600244 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
SSBP4-207ENST00000600244 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
SSBP4-207ENST00000600244 MT1LQ93083 61 aa6.13□□□□□ -1.43
SSBP4-207ENST00000600244 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
SSBP4-207ENST00000600244 MUC5ACP98088 5654 aa6.08□□□□□ -1.44
SSBP4-207ENST00000600244 ROMO1P60602 79 aa6.04□□□□□ -1.44
SSBP4-207ENST00000600244 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
SSBP4-207ENST00000600244 MUC5BQ9HC84 5762 aaPredicted RBP6.02□□□□□ -1.45
SSBP4-207ENST00000600244 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
SSBP4-207ENST00000600244 KRTAP4-11Q9BYQ6 195 aa5.96□□□□□ -1.46
SSBP4-207ENST00000600244 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
SSBP4-207ENST00000600244 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
SSBP4-207ENST00000600244 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
SSBP4-207ENST00000600244 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
SSBP4-207ENST00000600244 KRTAP5-8O75690 187 aa5.85□□□□□ -1.47
SSBP4-207ENST00000600244 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
SSBP4-207ENST00000600244 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
SSBP4-207ENST00000600244 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
SSBP4-207ENST00000600244 PRO0628Q9UI54 55 aa5.68□□□□□ -1.5
SSBP4-207ENST00000600244 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
SSBP4-207ENST00000600244 KRTAP5-2Q701N4 177 aa5.63□□□□□ -1.51
SSBP4-207ENST00000600244 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
SSBP4-207ENST00000600244 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
SSBP4-207ENST00000600244 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
SSBP4-207ENST00000600244 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
SSBP4-207ENST00000600244 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
SSBP4-207ENST00000600244 PRAC1Q96KF2 57 aa5.41□□□□□ -1.54
SSBP4-207ENST00000600244 KTN1-AS1Q86SY8 53 aa5.33□□□□□ -1.56
SSBP4-207ENST00000600244 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
SSBP4-207ENST00000600244 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
SSBP4-207ENST00000600244 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
SSBP4-207ENST00000600244 MT1AP04731 61 aa5.2□□□□□ -1.58
SSBP4-207ENST00000600244 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
SSBP4-207ENST00000600244 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
SSBP4-207ENST00000600244 H3BS24 57 aa4.94□□□□□ -1.62
SSBP4-207ENST00000600244 MT3P25713 68 aa4.79□□□□□ -1.64
SSBP4-207ENST00000600244 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
SSBP4-207ENST00000600244 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
SSBP4-207ENST00000600244 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
SSBP4-207ENST00000600244 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
SSBP4-207ENST00000600244 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
SSBP4-207ENST00000600244 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
SSBP4-207ENST00000600244 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
SSBP4-207ENST00000600244 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
SSBP4-207ENST00000600244 PHGR1C9JFL3 82 aa4.16□□□□□ -1.74
SSBP4-207ENST00000600244 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
SSBP4-207ENST00000600244 NDUFAF8A1L188 74 aa4□□□□□ -1.77
SSBP4-207ENST00000600244 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
SSBP4-207ENST00000600244 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
SSBP4-207ENST00000600244 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
SSBP4-207ENST00000600244 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
SSBP4-207ENST00000600244 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
SSBP4-207ENST00000600244 INE1O15225 51 aa3.31□□□□□ -1.88
SSBP4-207ENST00000600244 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
SSBP4-207ENST00000600244 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
SSBP4-207ENST00000600244 PRM1P04553 51 aa3.11□□□□□ -1.91
SSBP4-207ENST00000600244 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 94.1 ms