RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 GPR98Q8WXG9 6306 aa6.4□□□□□ -1.39
PNKP-210ENST00000597965 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
PNKP-210ENST00000597965 SVIPQ8NHG7 77 aa6.38□□□□□ -1.39
PNKP-210ENST00000597965 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
PNKP-210ENST00000597965 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
PNKP-210ENST00000597965 MT1EP04732 61 aa6.34□□□□□ -1.39
PNKP-210ENST00000597965 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
PNKP-210ENST00000597965 ROMO1P60602 79 aa6.29□□□□□ -1.4
PNKP-210ENST00000597965 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
PNKP-210ENST00000597965 MT1GP13640 62 aa6.23□□□□□ -1.41
PNKP-210ENST00000597965 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
PNKP-210ENST00000597965 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
PNKP-210ENST00000597965 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
PNKP-210ENST00000597965 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
PNKP-210ENST00000597965 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
PNKP-210ENST00000597965 MT4P47944 62 aa6.12□□□□□ -1.43
PNKP-210ENST00000597965 MT1MQ8N339 61 aa6.06□□□□□ -1.44
PNKP-210ENST00000597965 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
PNKP-210ENST00000597965 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
PNKP-210ENST00000597965 MT1LQ93083 61 aa6□□□□□ -1.45
PNKP-210ENST00000597965 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
PNKP-210ENST00000597965 KRTAP5-10Q6L8G5 202 aa5.95□□□□□ -1.46
PNKP-210ENST00000597965 TNP1P09430 55 aa5.94□□□□□ -1.46
PNKP-210ENST00000597965 KRTAP4-6Q9BYQ5 205 aa5.88□□□□□ -1.47
PNKP-210ENST00000597965 AHNAK2Q8IVF2 5795 aa5.87□□□□□ -1.47
PNKP-210ENST00000597965 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
PNKP-210ENST00000597965 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
PNKP-210ENST00000597965 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
PNKP-210ENST00000597965 KRTAP5-7Q6L8G8 165 aa5.78□□□□□ -1.48
PNKP-210ENST00000597965 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
PNKP-210ENST00000597965 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
PNKP-210ENST00000597965 KRTAP20-2Q3LI61 65 aa5.66□□□□□ -1.5
PNKP-210ENST00000597965 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
PNKP-210ENST00000597965 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
PNKP-210ENST00000597965 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
PNKP-210ENST00000597965 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
PNKP-210ENST00000597965 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
PNKP-210ENST00000597965 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
PNKP-210ENST00000597965 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
PNKP-210ENST00000597965 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
PNKP-210ENST00000597965 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
PNKP-210ENST00000597965 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
PNKP-210ENST00000597965 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
PNKP-210ENST00000597965 MT1AP04731 61 aa5.12□□□□□ -1.59
PNKP-210ENST00000597965 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
PNKP-210ENST00000597965 KRTAP5-8O75690 187 aa5.06□□□□□ -1.6
PNKP-210ENST00000597965 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
PNKP-210ENST00000597965 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
PNKP-210ENST00000597965 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
PNKP-210ENST00000597965 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
PNKP-210ENST00000597965 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
PNKP-210ENST00000597965 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
PNKP-210ENST00000597965 AHNAKQ09666 5890 aaKnown RBP4.89□□□□□ -1.63
PNKP-210ENST00000597965 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
PNKP-210ENST00000597965 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
PNKP-210ENST00000597965 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
PNKP-210ENST00000597965 MT3P25713 68 aa4.75□□□□□ -1.65
PNKP-210ENST00000597965 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
PNKP-210ENST00000597965 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
PNKP-210ENST00000597965 H3BS24 57 aa4.35□□□□□ -1.71
PNKP-210ENST00000597965 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
PNKP-210ENST00000597965 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
PNKP-210ENST00000597965 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
PNKP-210ENST00000597965 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
PNKP-210ENST00000597965 INE1O15225 51 aa4.06□□□□□ -1.76
PNKP-210ENST00000597965 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
PNKP-210ENST00000597965 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
PNKP-210ENST00000597965 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
PNKP-210ENST00000597965 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
PNKP-210ENST00000597965 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
PNKP-210ENST00000597965 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
PNKP-210ENST00000597965 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
PNKP-210ENST00000597965 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
PNKP-210ENST00000597965 PRM1P04553 51 aa3.28□□□□□ -1.88
PNKP-210ENST00000597965 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
PNKP-210ENST00000597965 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
PNKP-210ENST00000597965 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
PNKP-210ENST00000597965 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 216.2 ms