RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
SHKBP1-215ENST00000597649 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.42
SHKBP1-215ENST00000597649 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
SHKBP1-215ENST00000597649 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
SHKBP1-215ENST00000597649 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
SHKBP1-215ENST00000597649 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
SHKBP1-215ENST00000597649 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
SHKBP1-215ENST00000597649 MT1EP04732 61 aa6.16□□□□□ -1.42
SHKBP1-215ENST00000597649 TNP1P09430 55 aa6.13□□□□□ -1.43
SHKBP1-215ENST00000597649 MT4P47944 62 aa6.07□□□□□ -1.44
SHKBP1-215ENST00000597649 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
SHKBP1-215ENST00000597649 PMAIP1Q13794 54 aa6□□□□□ -1.45
SHKBP1-215ENST00000597649 KRTAP5-10Q6L8G5 202 aa6□□□□□ -1.45
SHKBP1-215ENST00000597649 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
SHKBP1-215ENST00000597649 MT1GP13640 62 aa5.97□□□□□ -1.45
SHKBP1-215ENST00000597649 ROMO1P60602 79 aa5.94□□□□□ -1.46
SHKBP1-215ENST00000597649 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
SHKBP1-215ENST00000597649 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
SHKBP1-215ENST00000597649 KRTAP5-4Q6L8H1 288 aa5.89□□□□□ -1.47
SHKBP1-215ENST00000597649 MT1MQ8N339 61 aa5.89□□□□□ -1.47
SHKBP1-215ENST00000597649 KRTAP4-6Q9BYQ5 205 aa5.89□□□□□ -1.47
SHKBP1-215ENST00000597649 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
SHKBP1-215ENST00000597649 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
SHKBP1-215ENST00000597649 KRTAP5-7Q6L8G8 165 aa5.81□□□□□ -1.48
SHKBP1-215ENST00000597649 MT1LQ93083 61 aa5.81□□□□□ -1.48
SHKBP1-215ENST00000597649 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
SHKBP1-215ENST00000597649 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
SHKBP1-215ENST00000597649 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
SHKBP1-215ENST00000597649 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
SHKBP1-215ENST00000597649 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
SHKBP1-215ENST00000597649 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
SHKBP1-215ENST00000597649 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
SHKBP1-215ENST00000597649 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
SHKBP1-215ENST00000597649 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
SHKBP1-215ENST00000597649 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
SHKBP1-215ENST00000597649 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
SHKBP1-215ENST00000597649 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
SHKBP1-215ENST00000597649 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
SHKBP1-215ENST00000597649 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
SHKBP1-215ENST00000597649 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
SHKBP1-215ENST00000597649 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
SHKBP1-215ENST00000597649 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
SHKBP1-215ENST00000597649 MUC5BQ9HC84 5762 aaPredicted RBP5.24□□□□□ -1.57
SHKBP1-215ENST00000597649 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
SHKBP1-215ENST00000597649 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
SHKBP1-215ENST00000597649 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
SHKBP1-215ENST00000597649 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
SHKBP1-215ENST00000597649 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
SHKBP1-215ENST00000597649 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
SHKBP1-215ENST00000597649 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
SHKBP1-215ENST00000597649 MT1AP04731 61 aa4.91□□□□□ -1.62
SHKBP1-215ENST00000597649 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
SHKBP1-215ENST00000597649 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
SHKBP1-215ENST00000597649 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
SHKBP1-215ENST00000597649 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
SHKBP1-215ENST00000597649 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.67
SHKBP1-215ENST00000597649 MT3P25713 68 aa4.5□□□□□ -1.69
SHKBP1-215ENST00000597649 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
SHKBP1-215ENST00000597649 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
SHKBP1-215ENST00000597649 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
SHKBP1-215ENST00000597649 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
SHKBP1-215ENST00000597649 A0A0A0MQY5 61 aa3.97□□□□□ -1.77
SHKBP1-215ENST00000597649 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
SHKBP1-215ENST00000597649 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
SHKBP1-215ENST00000597649 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
SHKBP1-215ENST00000597649 H3BS24 57 aa3.87□□□□□ -1.79
SHKBP1-215ENST00000597649 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SHKBP1-215ENST00000597649 INE1O15225 51 aa3.7□□□□□ -1.82
SHKBP1-215ENST00000597649 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
SHKBP1-215ENST00000597649 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SHKBP1-215ENST00000597649 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
SHKBP1-215ENST00000597649 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
SHKBP1-215ENST00000597649 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
SHKBP1-215ENST00000597649 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
SHKBP1-215ENST00000597649 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
SHKBP1-215ENST00000597649 PRM1P04553 51 aa3.06□□□□□ -1.92
SHKBP1-215ENST00000597649 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
SHKBP1-215ENST00000597649 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 127 ms