RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 LINC01554Q52M75 96 aa5.37□□□□□ -1.55
IRF3-218ENST00000597369 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
IRF3-218ENST00000597369 SPINT4Q6UDR6 99 aa5.33□□□□□ -1.56
IRF3-218ENST00000597369 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
IRF3-218ENST00000597369 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
IRF3-218ENST00000597369 MT4P47944 62 aa5.19□□□□□ -1.58
IRF3-218ENST00000597369 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
IRF3-218ENST00000597369 ROMO1P60602 79 aa5.17□□□□□ -1.58
IRF3-218ENST00000597369 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
IRF3-218ENST00000597369 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
IRF3-218ENST00000597369 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
IRF3-218ENST00000597369 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
IRF3-218ENST00000597369 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
IRF3-218ENST00000597369 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
IRF3-218ENST00000597369 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
IRF3-218ENST00000597369 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
IRF3-218ENST00000597369 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
IRF3-218ENST00000597369 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
IRF3-218ENST00000597369 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
IRF3-218ENST00000597369 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
IRF3-218ENST00000597369 TNP1P09430 55 aa4.9□□□□□ -1.63
IRF3-218ENST00000597369 H3BS24 57 aa4.88□□□□□ -1.63
IRF3-218ENST00000597369 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
IRF3-218ENST00000597369 MT1EP04732 61 aa4.83□□□□□ -1.64
IRF3-218ENST00000597369 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
IRF3-218ENST00000597369 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
IRF3-218ENST00000597369 MT1GP13640 62 aa4.77□□□□□ -1.65
IRF3-218ENST00000597369 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
IRF3-218ENST00000597369 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
IRF3-218ENST00000597369 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
IRF3-218ENST00000597369 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
IRF3-218ENST00000597369 MT1MQ8N339 61 aa4.65□□□□□ -1.67
IRF3-218ENST00000597369 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
IRF3-218ENST00000597369 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
IRF3-218ENST00000597369 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
IRF3-218ENST00000597369 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
IRF3-218ENST00000597369 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
IRF3-218ENST00000597369 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
IRF3-218ENST00000597369 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
IRF3-218ENST00000597369 MT1LQ93083 61 aa4.47□□□□□ -1.69
IRF3-218ENST00000597369 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
IRF3-218ENST00000597369 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
IRF3-218ENST00000597369 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
IRF3-218ENST00000597369 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
IRF3-218ENST00000597369 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
IRF3-218ENST00000597369 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
IRF3-218ENST00000597369 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
IRF3-218ENST00000597369 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
IRF3-218ENST00000597369 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
IRF3-218ENST00000597369 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
IRF3-218ENST00000597369 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
IRF3-218ENST00000597369 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
IRF3-218ENST00000597369 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
IRF3-218ENST00000597369 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
IRF3-218ENST00000597369 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
IRF3-218ENST00000597369 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
IRF3-218ENST00000597369 INE1O15225 51 aa3.85□□□□□ -1.79
IRF3-218ENST00000597369 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
IRF3-218ENST00000597369 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
IRF3-218ENST00000597369 MT1AP04731 61 aa3.79□□□□□ -1.8
IRF3-218ENST00000597369 MT3P25713 68 aa3.52□□□□□ -1.85
IRF3-218ENST00000597369 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
IRF3-218ENST00000597369 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
IRF3-218ENST00000597369 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
IRF3-218ENST00000597369 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
IRF3-218ENST00000597369 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
IRF3-218ENST00000597369 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
IRF3-218ENST00000597369 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
IRF3-218ENST00000597369 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
IRF3-218ENST00000597369 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
IRF3-218ENST00000597369 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
IRF3-218ENST00000597369 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
IRF3-218ENST00000597369 PRM1P04553 51 aa2.68□□□□□ -1.98
IRF3-218ENST00000597369 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
IRF3-218ENST00000597369 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
IRF3-218ENST00000597369 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
IRF3-218ENST00000597369 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
IRF3-218ENST00000597369 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms