RNA–Protein interactions for RNA: ENST00000597353.5

SNRPA-203, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-203ENST00000597353 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
SNRPA-203ENST00000597353 PSPHP1O15172 72 aa7.57□□□□□ -1.2
SNRPA-203ENST00000597353 Q1T7F1 81 aa7.57□□□□□ -1.2
SNRPA-203ENST00000597353 V9GYY9 64 aa7.55□□□□□ -1.2
SNRPA-203ENST00000597353 KRTAP4-3Q9BYR4 195 aa7.5□□□□□ -1.21
SNRPA-203ENST00000597353 RPS28P62857 69 aaKnown RBP7.49□□□□□ -1.21
SNRPA-203ENST00000597353 KRTAP12-3P60328 96 aa7.48□□□□□ -1.21
SNRPA-203ENST00000597353 KRTAP4-9Q9BYQ8 210 aa7.45□□□□□ -1.22
SNRPA-203ENST00000597353 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
SNRPA-203ENST00000597353 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
SNRPA-203ENST00000597353 K7ERS5 55 aa7.36□□□□□ -1.23
SNRPA-203ENST00000597353 LCE1DQ5T752 114 aa7.3□□□□□ -1.24
SNRPA-203ENST00000597353 HMCN1Q96RW7 5635 aa7.3□□□□□ -1.24
SNRPA-203ENST00000597353 LCE4AQ5TA78 99 aa7.29□□□□□ -1.24
SNRPA-203ENST00000597353 A6NED7 52 aa7.27□□□□□ -1.25
SNRPA-203ENST00000597353 KRTAP5-4Q6L8H1 288 aa7.26□□□□□ -1.25
SNRPA-203ENST00000597353 GPR98Q8WXG9 6306 aa7.21□□□□□ -1.26
SNRPA-203ENST00000597353 MT4P47944 62 aa7.2□□□□□ -1.26
SNRPA-203ENST00000597353 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
SNRPA-203ENST00000597353 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
SNRPA-203ENST00000597353 KRTAP5-5Q701N2 237 aaPredicted RBP7.06□□□□□ -1.28
SNRPA-203ENST00000597353 CDC42SE1Q9NRR8 79 aa7.05□□□□□ -1.28
SNRPA-203ENST00000597353 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
SNRPA-203ENST00000597353 AHNAK2Q8IVF2 5795 aa7.02□□□□□ -1.29
SNRPA-203ENST00000597353 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
SNRPA-203ENST00000597353 ROMO1P60602 79 aa6.99□□□□□ -1.29
SNRPA-203ENST00000597353 LOC100996750A0A140TA64 210 aa6.97□□□□□ -1.29
SNRPA-203ENST00000597353 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
SNRPA-203ENST00000597353 KRTAP20-2Q3LI61 65 aa6.82□□□□□ -1.32
SNRPA-203ENST00000597353 SYNE1Q8NF91 8797 aaKnown RBP6.81□□□□□ -1.32
SNRPA-203ENST00000597353 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
SNRPA-203ENST00000597353 KRTAP5-10Q6L8G5 202 aa6.76□□□□□ -1.33
SNRPA-203ENST00000597353 KRTAP12-4P60329 112 aa6.71□□□□□ -1.34
SNRPA-203ENST00000597353 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
SNRPA-203ENST00000597353 KRTAP9-6A8MVA2 160 aa6.62□□□□□ -1.35
SNRPA-203ENST00000597353 BRK1Q8WUW1 75 aa6.57□□□□□ -1.36
SNRPA-203ENST00000597353 MT1AP04731 61 aa6.54□□□□□ -1.36
SNRPA-203ENST00000597353 KRTAP6-1Q3LI64 71 aa6.53□□□□□ -1.36
SNRPA-203ENST00000597353 KRTAP5-7Q6L8G8 165 aa6.45□□□□□ -1.38
SNRPA-203ENST00000597353 KRTAP5-2Q701N4 177 aa6.4□□□□□ -1.38
SNRPA-203ENST00000597353 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
SNRPA-203ENST00000597353 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
SNRPA-203ENST00000597353 KRTAP6-2Q3LI66 62 aa6.2□□□□□ -1.42
SNRPA-203ENST00000597353 KRTAP4-11Q9BYQ6 195 aa6.18□□□□□ -1.42
SNRPA-203ENST00000597353 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
SNRPA-203ENST00000597353 KRTAP5-8O75690 187 aa6□□□□□ -1.45
SNRPA-203ENST00000597353 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
SNRPA-203ENST00000597353 MT3P25713 68 aa5.94□□□□□ -1.46
SNRPA-203ENST00000597353 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
SNRPA-203ENST00000597353 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
SNRPA-203ENST00000597353 MUC5BQ9HC84 5762 aaPredicted RBP5.74□□□□□ -1.49
SNRPA-203ENST00000597353 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
SNRPA-203ENST00000597353 KRTAP5-1Q6L8H4 278 aa5.71□□□□□ -1.5
SNRPA-203ENST00000597353 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
SNRPA-203ENST00000597353 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
SNRPA-203ENST00000597353 LCE1EQ5T753 118 aa5.46□□□□□ -1.54
SNRPA-203ENST00000597353 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
SNRPA-203ENST00000597353 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
SNRPA-203ENST00000597353 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
SNRPA-203ENST00000597353 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
SNRPA-203ENST00000597353 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
SNRPA-203ENST00000597353 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
SNRPA-203ENST00000597353 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
SNRPA-203ENST00000597353 H3BS24 57 aa4.72□□□□□ -1.65
SNRPA-203ENST00000597353 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
SNRPA-203ENST00000597353 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
SNRPA-203ENST00000597353 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
SNRPA-203ENST00000597353 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
SNRPA-203ENST00000597353 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
SNRPA-203ENST00000597353 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
SNRPA-203ENST00000597353 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
SNRPA-203ENST00000597353 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
SNRPA-203ENST00000597353 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
SNRPA-203ENST00000597353 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SNRPA-203ENST00000597353 INE1O15225 51 aa3.6□□□□□ -1.83
SNRPA-203ENST00000597353 PRM1P04553 51 aa3.6□□□□□ -1.83
SNRPA-203ENST00000597353 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
SNRPA-203ENST00000597353 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 89.7 ms