RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 UQCR11O14957 56 aa3.71□□□□□ -1.82
CCDC9-203ENST00000596938 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
CCDC9-203ENST00000596938 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.83
CCDC9-203ENST00000596938 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
CCDC9-203ENST00000596938 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
CCDC9-203ENST00000596938 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
CCDC9-203ENST00000596938 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
CCDC9-203ENST00000596938 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
CCDC9-203ENST00000596938 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
CCDC9-203ENST00000596938 MT4P47944 62 aa3.57□□□□□ -1.84
CCDC9-203ENST00000596938 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
CCDC9-203ENST00000596938 V9GYY9 64 aa3.57□□□□□ -1.84
CCDC9-203ENST00000596938 K7ERS5 55 aa3.55□□□□□ -1.84
CCDC9-203ENST00000596938 Q1T7F1 81 aa3.54□□□□□ -1.84
CCDC9-203ENST00000596938 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
CCDC9-203ENST00000596938 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
CCDC9-203ENST00000596938 PSPHP1O15172 72 aa3.51□□□□□ -1.85
CCDC9-203ENST00000596938 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
CCDC9-203ENST00000596938 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
CCDC9-203ENST00000596938 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
CCDC9-203ENST00000596938 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
CCDC9-203ENST00000596938 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
CCDC9-203ENST00000596938 A6NED7 52 aa3.4□□□□□ -1.87
CCDC9-203ENST00000596938 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
CCDC9-203ENST00000596938 RPS28P62857 69 aaKnown RBP3.38□□□□□ -1.87
CCDC9-203ENST00000596938 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
CCDC9-203ENST00000596938 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
CCDC9-203ENST00000596938 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
CCDC9-203ENST00000596938 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
CCDC9-203ENST00000596938 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
CCDC9-203ENST00000596938 CDC42SE1Q9NRR8 79 aa3.35□□□□□ -1.87
CCDC9-203ENST00000596938 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
CCDC9-203ENST00000596938 ROMO1P60602 79 aa3.31□□□□□ -1.88
CCDC9-203ENST00000596938 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
CCDC9-203ENST00000596938 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
CCDC9-203ENST00000596938 MT1AP04731 61 aa3.19□□□□□ -1.9
CCDC9-203ENST00000596938 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
CCDC9-203ENST00000596938 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
CCDC9-203ENST00000596938 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
CCDC9-203ENST00000596938 SVIPQ8NHG7 77 aa3.11□□□□□ -1.91
CCDC9-203ENST00000596938 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
CCDC9-203ENST00000596938 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
CCDC9-203ENST00000596938 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
CCDC9-203ENST00000596938 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CCDC9-203ENST00000596938 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
CCDC9-203ENST00000596938 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
CCDC9-203ENST00000596938 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
CCDC9-203ENST00000596938 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
CCDC9-203ENST00000596938 MT3P25713 68 aa2.93□□□□□ -1.94
CCDC9-203ENST00000596938 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
CCDC9-203ENST00000596938 MUC5ACP98088 5654 aa2.9□□□□□ -1.94
CCDC9-203ENST00000596938 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
CCDC9-203ENST00000596938 PMAIP1Q13794 54 aa2.81□□□□□ -1.96
CCDC9-203ENST00000596938 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
CCDC9-203ENST00000596938 PRAC1Q96KF2 57 aa2.76□□□□□ -1.97
CCDC9-203ENST00000596938 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
CCDC9-203ENST00000596938 H3BS24 57 aa2.72□□□□□ -1.97
CCDC9-203ENST00000596938 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
CCDC9-203ENST00000596938 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
CCDC9-203ENST00000596938 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
CCDC9-203ENST00000596938 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
CCDC9-203ENST00000596938 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
CCDC9-203ENST00000596938 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
CCDC9-203ENST00000596938 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
CCDC9-203ENST00000596938 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
CCDC9-203ENST00000596938 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CCDC9-203ENST00000596938 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
CCDC9-203ENST00000596938 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
CCDC9-203ENST00000596938 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
CCDC9-203ENST00000596938 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
CCDC9-203ENST00000596938 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
CCDC9-203ENST00000596938 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
CCDC9-203ENST00000596938 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
CCDC9-203ENST00000596938 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
CCDC9-203ENST00000596938 INE1O15225 51 aa1.68□□□□□ -2.14
CCDC9-203ENST00000596938 PRM1P04553 51 aa1.67□□□□□ -2.14
CCDC9-203ENST00000596938 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
CCDC9-203ENST00000596938 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 125.1 ms