RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
CCDC9-202ENST00000595659 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CCDC9-202ENST00000595659 ANAPC13Q9BS18 74 aa5.8□□□□□ -1.48
CCDC9-202ENST00000595659 AHNAK2Q8IVF2 5795 aa5.8□□□□□ -1.48
CCDC9-202ENST00000595659 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
CCDC9-202ENST00000595659 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
CCDC9-202ENST00000595659 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
CCDC9-202ENST00000595659 KRTAP5-10Q6L8G5 202 aa5.71□□□□□ -1.5
CCDC9-202ENST00000595659 LINC01558Q9Y6Z2 57 aa5.67□□□□□ -1.5
CCDC9-202ENST00000595659 ATP5EP56381 51 aaPredicted RBP5.62□□□□□ -1.51
CCDC9-202ENST00000595659 UQCR11O14957 56 aa5.56□□□□□ -1.52
CCDC9-202ENST00000595659 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
CCDC9-202ENST00000595659 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
CCDC9-202ENST00000595659 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
CCDC9-202ENST00000595659 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
CCDC9-202ENST00000595659 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
CCDC9-202ENST00000595659 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
CCDC9-202ENST00000595659 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
CCDC9-202ENST00000595659 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
CCDC9-202ENST00000595659 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
CCDC9-202ENST00000595659 TMEM258P61165 79 aa5.43□□□□□ -1.54
CCDC9-202ENST00000595659 K7ERS5 55 aa5.35□□□□□ -1.55
CCDC9-202ENST00000595659 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.56
CCDC9-202ENST00000595659 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
CCDC9-202ENST00000595659 PSPHP1O15172 72 aa5.28□□□□□ -1.56
CCDC9-202ENST00000595659 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CCDC9-202ENST00000595659 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
CCDC9-202ENST00000595659 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
CCDC9-202ENST00000595659 V9GYY9 64 aa5.16□□□□□ -1.58
CCDC9-202ENST00000595659 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
CCDC9-202ENST00000595659 Q1T7F1 81 aa5.13□□□□□ -1.59
CCDC9-202ENST00000595659 MT1AP04731 61 aa5.12□□□□□ -1.59
CCDC9-202ENST00000595659 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
CCDC9-202ENST00000595659 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
CCDC9-202ENST00000595659 A6NED7 52 aa5.06□□□□□ -1.6
CCDC9-202ENST00000595659 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
CCDC9-202ENST00000595659 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
CCDC9-202ENST00000595659 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
CCDC9-202ENST00000595659 ROMO1P60602 79 aa4.97□□□□□ -1.61
CCDC9-202ENST00000595659 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
CCDC9-202ENST00000595659 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
CCDC9-202ENST00000595659 KRTAP5-8O75690 187 aa4.94□□□□□ -1.62
CCDC9-202ENST00000595659 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
CCDC9-202ENST00000595659 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
CCDC9-202ENST00000595659 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
CCDC9-202ENST00000595659 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
CCDC9-202ENST00000595659 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
CCDC9-202ENST00000595659 MT3P25713 68 aa4.7□□□□□ -1.66
CCDC9-202ENST00000595659 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
CCDC9-202ENST00000595659 PCP4P48539 62 aa4.41□□□□□ -1.7
CCDC9-202ENST00000595659 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
CCDC9-202ENST00000595659 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
CCDC9-202ENST00000595659 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
CCDC9-202ENST00000595659 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
CCDC9-202ENST00000595659 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
CCDC9-202ENST00000595659 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
CCDC9-202ENST00000595659 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
CCDC9-202ENST00000595659 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
CCDC9-202ENST00000595659 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
CCDC9-202ENST00000595659 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
CCDC9-202ENST00000595659 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
CCDC9-202ENST00000595659 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
CCDC9-202ENST00000595659 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
CCDC9-202ENST00000595659 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
CCDC9-202ENST00000595659 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
CCDC9-202ENST00000595659 PRO0628Q9UI54 55 aa3.27□□□□□ -1.89
CCDC9-202ENST00000595659 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
CCDC9-202ENST00000595659 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
CCDC9-202ENST00000595659 SVIPQ8NHG7 77 aa3.19□□□□□ -1.9
CCDC9-202ENST00000595659 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
CCDC9-202ENST00000595659 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CCDC9-202ENST00000595659 PRM1P04553 51 aa2.57□□□□□ -2
CCDC9-202ENST00000595659 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
CCDC9-202ENST00000595659 NDUFAF8A1L188 74 aa2.32□□□□□ -2.04
CCDC9-202ENST00000595659 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
CCDC9-202ENST00000595659 H3BS24 57 aa1.91□□□□□ -2.1
CCDC9-202ENST00000595659 A0A0A0MQY5 61 aa1.83□□□□□ -2.12
CCDC9-202ENST00000595659 INE1O15225 51 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 114.3 ms