RNA–Protein interactions for RNA: ENST00000594643.1

KDELR1-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 1, humanhuman

TSL 2

Gene KDELR1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR1-202ENST00000594643 V9GYY9 64 aa7□□□□□ -1.29
KDELR1-202ENST00000594643 PSPHP1O15172 72 aa6.97□□□□□ -1.29
KDELR1-202ENST00000594643 Q1T7F1 81 aa6.97□□□□□ -1.29
KDELR1-202ENST00000594643 KRTAP4-9Q9BYQ8 210 aa6.97□□□□□ -1.29
KDELR1-202ENST00000594643 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
KDELR1-202ENST00000594643 KRTAP4-3Q9BYR4 195 aa6.95□□□□□ -1.3
KDELR1-202ENST00000594643 KRTAP25-1Q3LHN0 102 aa6.91□□□□□ -1.3
KDELR1-202ENST00000594643 K7ERS5 55 aa6.9□□□□□ -1.3
KDELR1-202ENST00000594643 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
KDELR1-202ENST00000594643 LCE1DQ5T752 114 aa6.84□□□□□ -1.31
KDELR1-202ENST00000594643 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
KDELR1-202ENST00000594643 HMCN1Q96RW7 5635 aa6.78□□□□□ -1.32
KDELR1-202ENST00000594643 KRTAP5-4Q6L8H1 288 aa6.77□□□□□ -1.33
KDELR1-202ENST00000594643 GPR98Q8WXG9 6306 aa6.76□□□□□ -1.33
KDELR1-202ENST00000594643 MT4P47944 62 aa6.75□□□□□ -1.33
KDELR1-202ENST00000594643 A6NED7 52 aa6.72□□□□□ -1.33
KDELR1-202ENST00000594643 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
KDELR1-202ENST00000594643 RPS28P62857 69 aaKnown RBP6.64□□□□□ -1.35
KDELR1-202ENST00000594643 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
KDELR1-202ENST00000594643 PCP4P48539 62 aa6.57□□□□□ -1.36
KDELR1-202ENST00000594643 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
KDELR1-202ENST00000594643 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
KDELR1-202ENST00000594643 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
KDELR1-202ENST00000594643 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
KDELR1-202ENST00000594643 AHNAK2Q8IVF2 5795 aa6.5□□□□□ -1.37
KDELR1-202ENST00000594643 ROMO1P60602 79 aa6.47□□□□□ -1.37
KDELR1-202ENST00000594643 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
KDELR1-202ENST00000594643 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
KDELR1-202ENST00000594643 KRTAP20-2Q3LI61 65 aa6.37□□□□□ -1.39
KDELR1-202ENST00000594643 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
KDELR1-202ENST00000594643 KRTAP5-10Q6L8G5 202 aa6.33□□□□□ -1.4
KDELR1-202ENST00000594643 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
KDELR1-202ENST00000594643 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
KDELR1-202ENST00000594643 KRTAP5-3Q6L8H2 238 aa6.2□□□□□ -1.42
KDELR1-202ENST00000594643 MT1AP04731 61 aa6.1□□□□□ -1.43
KDELR1-202ENST00000594643 KRTAP9-6A8MVA2 160 aa6.08□□□□□ -1.44
KDELR1-202ENST00000594643 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
KDELR1-202ENST00000594643 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
KDELR1-202ENST00000594643 KRTAP5-2Q701N4 177 aa5.95□□□□□ -1.46
KDELR1-202ENST00000594643 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
KDELR1-202ENST00000594643 BRK1Q8WUW1 75 aa5.81□□□□□ -1.48
KDELR1-202ENST00000594643 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
KDELR1-202ENST00000594643 KRTAP6-2Q3LI66 62 aa5.77□□□□□ -1.49
KDELR1-202ENST00000594643 KRTAP5-8O75690 187 aa5.6□□□□□ -1.51
KDELR1-202ENST00000594643 MT3P25713 68 aa5.56□□□□□ -1.52
KDELR1-202ENST00000594643 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
KDELR1-202ENST00000594643 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
KDELR1-202ENST00000594643 MUC5BQ9HC84 5762 aaPredicted RBP5.35□□□□□ -1.55
KDELR1-202ENST00000594643 AHNAKQ09666 5890 aaKnown RBP5.33□□□□□ -1.56
KDELR1-202ENST00000594643 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
KDELR1-202ENST00000594643 MUC5ACP98088 5654 aa5.3□□□□□ -1.56
KDELR1-202ENST00000594643 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
KDELR1-202ENST00000594643 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
KDELR1-202ENST00000594643 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
KDELR1-202ENST00000594643 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
KDELR1-202ENST00000594643 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
KDELR1-202ENST00000594643 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
KDELR1-202ENST00000594643 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
KDELR1-202ENST00000594643 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
KDELR1-202ENST00000594643 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
KDELR1-202ENST00000594643 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
KDELR1-202ENST00000594643 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
KDELR1-202ENST00000594643 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
KDELR1-202ENST00000594643 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
KDELR1-202ENST00000594643 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
KDELR1-202ENST00000594643 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
KDELR1-202ENST00000594643 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
KDELR1-202ENST00000594643 H3BS24 57 aa4□□□□□ -1.77
KDELR1-202ENST00000594643 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
KDELR1-202ENST00000594643 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
KDELR1-202ENST00000594643 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
KDELR1-202ENST00000594643 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
KDELR1-202ENST00000594643 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
KDELR1-202ENST00000594643 PRM1P04553 51 aa3.31□□□□□ -1.88
KDELR1-202ENST00000594643 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
KDELR1-202ENST00000594643 INE1O15225 51 aa2.83□□□□□ -1.96
KDELR1-202ENST00000594643 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
KDELR1-202ENST00000594643 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms