RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
SMAD4-215ENST00000592911 ACYP2P14621 99 aa3.63□□□□□ -1.83
SMAD4-215ENST00000592911 MT1XP80297 61 aa3.63□□□□□ -1.83
SMAD4-215ENST00000592911 UQCR11O14957 56 aa3.62□□□□□ -1.83
SMAD4-215ENST00000592911 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
SMAD4-215ENST00000592911 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
SMAD4-215ENST00000592911 A0A1B0GU69 56 aa3.58□□□□□ -1.84
SMAD4-215ENST00000592911 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-215ENST00000592911 ADM2Q7Z4H4 148 aa3.56□□□□□ -1.84
SMAD4-215ENST00000592911 ROMO1P60602 79 aa3.55□□□□□ -1.84
SMAD4-215ENST00000592911 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
SMAD4-215ENST00000592911 DMAC1Q96GE9 116 aa3.53□□□□□ -1.84
SMAD4-215ENST00000592911 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
SMAD4-215ENST00000592911 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
SMAD4-215ENST00000592911 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
SMAD4-215ENST00000592911 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
SMAD4-215ENST00000592911 R4GN34 69 aa3.47□□□□□ -1.85
SMAD4-215ENST00000592911 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
SMAD4-215ENST00000592911 K7ERS5 55 aa3.43□□□□□ -1.86
SMAD4-215ENST00000592911 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
SMAD4-215ENST00000592911 M0QZ58 72 aa3.37□□□□□ -1.87
SMAD4-215ENST00000592911 P0C880 135 aa3.35□□□□□ -1.87
SMAD4-215ENST00000592911 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.88
SMAD4-215ENST00000592911 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
SMAD4-215ENST00000592911 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
SMAD4-215ENST00000592911 A0A1B0GU33 70 aa3.31□□□□□ -1.88
SMAD4-215ENST00000592911 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
SMAD4-215ENST00000592911 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SMAD4-215ENST00000592911 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
SMAD4-215ENST00000592911 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
SMAD4-215ENST00000592911 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
SMAD4-215ENST00000592911 MT1EP04732 61 aa3.26□□□□□ -1.89
SMAD4-215ENST00000592911 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
SMAD4-215ENST00000592911 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
SMAD4-215ENST00000592911 MT1GP13640 62 aa3.23□□□□□ -1.89
SMAD4-215ENST00000592911 MT4P47944 62 aa3.23□□□□□ -1.89
SMAD4-215ENST00000592911 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
SMAD4-215ENST00000592911 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
SMAD4-215ENST00000592911 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
SMAD4-215ENST00000592911 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
SMAD4-215ENST00000592911 MT1MQ8N339 61 aa3.11□□□□□ -1.91
SMAD4-215ENST00000592911 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
SMAD4-215ENST00000592911 MT1LQ93083 61 aa3.05□□□□□ -1.92
SMAD4-215ENST00000592911 A0A0D9SG42 100 aa3.04□□□□□ -1.92
SMAD4-215ENST00000592911 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
SMAD4-215ENST00000592911 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
SMAD4-215ENST00000592911 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SMAD4-215ENST00000592911 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
SMAD4-215ENST00000592911 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
SMAD4-215ENST00000592911 KRTAP13-4Q3LI77 160 aa2.95□□□□□ -1.94
SMAD4-215ENST00000592911 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
SMAD4-215ENST00000592911 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
SMAD4-215ENST00000592911 KRTAP12-1P59990 96 aa2.91□□□□□ -1.94
SMAD4-215ENST00000592911 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
SMAD4-215ENST00000592911 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
SMAD4-215ENST00000592911 INE1O15225 51 aa2.84□□□□□ -1.95
SMAD4-215ENST00000592911 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
SMAD4-215ENST00000592911 TNP1P09430 55 aa2.83□□□□□ -1.96
SMAD4-215ENST00000592911 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
SMAD4-215ENST00000592911 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
SMAD4-215ENST00000592911 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
SMAD4-215ENST00000592911 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
SMAD4-215ENST00000592911 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
SMAD4-215ENST00000592911 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SMAD4-215ENST00000592911 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
SMAD4-215ENST00000592911 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
SMAD4-215ENST00000592911 MT1AP04731 61 aa2.62□□□□□ -1.99
SMAD4-215ENST00000592911 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
SMAD4-215ENST00000592911 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
SMAD4-215ENST00000592911 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
SMAD4-215ENST00000592911 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
SMAD4-215ENST00000592911 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
SMAD4-215ENST00000592911 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
SMAD4-215ENST00000592911 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
SMAD4-215ENST00000592911 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
SMAD4-215ENST00000592911 PRM1P04553 51 aa1.71□□□□□ -2.14
SMAD4-215ENST00000592911 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
SMAD4-215ENST00000592911 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 1263.3 ms