RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SMIM26A0A096LP01 95 aa6.7□□□□□ -1.34
CCDC43-205ENST00000592333 COX7CP15954 63 aa6.69□□□□□ -1.34
CCDC43-205ENST00000592333 MT1LQ93083 61 aa6.69□□□□□ -1.34
CCDC43-205ENST00000592333 H7BZZ5 65 aa6.64□□□□□ -1.35
CCDC43-205ENST00000592333 HMCN1Q96RW7 5635 aa6.63□□□□□ -1.35
CCDC43-205ENST00000592333 A0A1B0GU69 56 aa6.62□□□□□ -1.35
CCDC43-205ENST00000592333 TNP1P09430 55 aa6.6□□□□□ -1.35
CCDC43-205ENST00000592333 MT4P47944 62 aa6.6□□□□□ -1.35
CCDC43-205ENST00000592333 KRTAP5-4Q6L8H1 288 aa6.59□□□□□ -1.35
CCDC43-205ENST00000592333 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
CCDC43-205ENST00000592333 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
CCDC43-205ENST00000592333 A8MU10 97 aa6.51□□□□□ -1.37
CCDC43-205ENST00000592333 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
CCDC43-205ENST00000592333 KRTAP5-10Q6L8G5 202 aa6.41□□□□□ -1.38
CCDC43-205ENST00000592333 AHNAK2Q8IVF2 5795 aa6.41□□□□□ -1.38
CCDC43-205ENST00000592333 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
CCDC43-205ENST00000592333 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
CCDC43-205ENST00000592333 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
CCDC43-205ENST00000592333 ANAPC13Q9BS18 74 aa6.28□□□□□ -1.4
CCDC43-205ENST00000592333 ATP5EP56381 51 aaPredicted RBP6.27□□□□□ -1.41
CCDC43-205ENST00000592333 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
CCDC43-205ENST00000592333 KRTAP5-7Q6L8G8 165 aa6.22□□□□□ -1.41
CCDC43-205ENST00000592333 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
CCDC43-205ENST00000592333 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
CCDC43-205ENST00000592333 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
CCDC43-205ENST00000592333 UQCR11O14957 56 aa6.17□□□□□ -1.42
CCDC43-205ENST00000592333 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
CCDC43-205ENST00000592333 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
CCDC43-205ENST00000592333 CCDC179H3BU77 68 aa6.12□□□□□ -1.43
CCDC43-205ENST00000592333 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
CCDC43-205ENST00000592333 K7ERS5 55 aa5.97□□□□□ -1.45
CCDC43-205ENST00000592333 TMEM258P61165 79 aa5.97□□□□□ -1.45
CCDC43-205ENST00000592333 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
CCDC43-205ENST00000592333 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
CCDC43-205ENST00000592333 V9GYY9 64 aa5.78□□□□□ -1.48
CCDC43-205ENST00000592333 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
CCDC43-205ENST00000592333 MT1AP04731 61 aa5.71□□□□□ -1.5
CCDC43-205ENST00000592333 Q1T7F1 81 aa5.67□□□□□ -1.5
CCDC43-205ENST00000592333 PSPHP1O15172 72 aa5.65□□□□□ -1.5
CCDC43-205ENST00000592333 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
CCDC43-205ENST00000592333 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.6□□□□□ -1.51
CCDC43-205ENST00000592333 CDC42SE1Q9NRR8 79 aa5.58□□□□□ -1.52
CCDC43-205ENST00000592333 KRTAP5-11Q6L8G4 156 aa5.55□□□□□ -1.52
CCDC43-205ENST00000592333 KRTAP5-8O75690 187 aa5.53□□□□□ -1.52
CCDC43-205ENST00000592333 PCP4P48539 62 aa5.53□□□□□ -1.52
CCDC43-205ENST00000592333 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
CCDC43-205ENST00000592333 A6NED7 52 aa5.48□□□□□ -1.53
CCDC43-205ENST00000592333 ROMO1P60602 79 aa5.46□□□□□ -1.54
CCDC43-205ENST00000592333 LCE1EQ5T753 118 aa5.45□□□□□ -1.54
CCDC43-205ENST00000592333 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
CCDC43-205ENST00000592333 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
CCDC43-205ENST00000592333 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
CCDC43-205ENST00000592333 MT3P25713 68 aa5.38□□□□□ -1.55
CCDC43-205ENST00000592333 MUC5ACP98088 5654 aa5.38□□□□□ -1.55
CCDC43-205ENST00000592333 MUC5BQ9HC84 5762 aaPredicted RBP5.34□□□□□ -1.55
CCDC43-205ENST00000592333 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.55
CCDC43-205ENST00000592333 A0A0A0MQY5 61 aa5.22□□□□□ -1.57
CCDC43-205ENST00000592333 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
CCDC43-205ENST00000592333 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
CCDC43-205ENST00000592333 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
CCDC43-205ENST00000592333 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
CCDC43-205ENST00000592333 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
CCDC43-205ENST00000592333 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
CCDC43-205ENST00000592333 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
CCDC43-205ENST00000592333 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
CCDC43-205ENST00000592333 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
CCDC43-205ENST00000592333 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
CCDC43-205ENST00000592333 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
CCDC43-205ENST00000592333 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
CCDC43-205ENST00000592333 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
CCDC43-205ENST00000592333 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
CCDC43-205ENST00000592333 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
CCDC43-205ENST00000592333 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
CCDC43-205ENST00000592333 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
CCDC43-205ENST00000592333 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
CCDC43-205ENST00000592333 PRM1P04553 51 aa2.73□□□□□ -1.97
CCDC43-205ENST00000592333 INE1O15225 51 aa2.44□□□□□ -2.02
CCDC43-205ENST00000592333 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 82 ms