RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SMIM20Q8N5G0 67 aa1.66□□□□□ -2.14
VMP1-205ENST00000587470 LINC01554Q52M75 96 aa1.65□□□□□ -2.15
VMP1-205ENST00000587470 CSAG1Q6PB30 78 aa1.65□□□□□ -2.15
VMP1-205ENST00000587470 KTN1-AS1Q86SY8 53 aa1.65□□□□□ -2.15
VMP1-205ENST00000587470 S4R3F8 94 aa1.65□□□□□ -2.15
VMP1-205ENST00000587470 TMEM258P61165 79 aa1.64□□□□□ -2.15
VMP1-205ENST00000587470 SPRR2EP22531 72 aa1.63□□□□□ -2.15
VMP1-205ENST00000587470 SPRR2BP35325 72 aa1.63□□□□□ -2.15
VMP1-205ENST00000587470 SPRR2AP35326 72 aa1.63□□□□□ -2.15
VMP1-205ENST00000587470 DMAC1Q96GE9 116 aa1.63□□□□□ -2.15
VMP1-205ENST00000587470 MDN1Q9NU22 5596 aa1.63□□□□□ -2.15
VMP1-205ENST00000587470 H0YAA0 97 aa1.62□□□□□ -2.15
VMP1-205ENST00000587470 SERP2Q8N6R1 65 aa1.62□□□□□ -2.15
VMP1-205ENST00000587470 SPRR2GQ9BYE4 73 aa1.62□□□□□ -2.15
VMP1-205ENST00000587470 A6NN06 94 aa1.61□□□□□ -2.15
VMP1-205ENST00000587470 NDUFC1O43677 76 aa1.61□□□□□ -2.15
VMP1-205ENST00000587470 MT1BP07438 61 aa1.61□□□□□ -2.15
VMP1-205ENST00000587470 KRTAP19-8Q3LI54 63 aa1.61□□□□□ -2.15
VMP1-205ENST00000587470 SNURFQ9Y675 71 aa1.61□□□□□ -2.15
VMP1-205ENST00000587470 C20orf197Q8N268 126 aa1.6□□□□□ -2.15
VMP1-205ENST00000587470 COX7CP15954 63 aa1.59□□□□□ -2.15
VMP1-205ENST00000587470 ACYP2P14621 99 aa1.58□□□□□ -2.16
VMP1-205ENST00000587470 SPRR2DP22532 72 aa1.58□□□□□ -2.16
VMP1-205ENST00000587470 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
VMP1-205ENST00000587470 CYSTM1Q9H1C7 97 aa1.58□□□□□ -2.16
VMP1-205ENST00000587470 CRIPTQ9P021 101 aa1.58□□□□□ -2.16
VMP1-205ENST00000587470 H7BZZ5 65 aa1.57□□□□□ -2.16
VMP1-205ENST00000587470 Q5VV11 94 aa1.55□□□□□ -2.16
VMP1-205ENST00000587470 KRTAP13-4Q3LI77 160 aa1.54□□□□□ -2.16
VMP1-205ENST00000587470 CCDC179H3BU77 68 aa1.53□□□□□ -2.16
VMP1-205ENST00000587470 RPS28P62857 69 aaKnown RBP1.53□□□□□ -2.16
VMP1-205ENST00000587470 Q1T7F1 81 aa1.53□□□□□ -2.16
VMP1-205ENST00000587470 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
VMP1-205ENST00000587470 COA5Q86WW8 74 aa1.53□□□□□ -2.16
VMP1-205ENST00000587470 CHKB-CPT1BH3BT56 60 aa1.52□□□□□ -2.17
VMP1-205ENST00000587470 MT1XP80297 61 aa1.52□□□□□ -2.17
VMP1-205ENST00000587470 SPTSSBQ8NFR3 76 aa1.52□□□□□ -2.17
VMP1-205ENST00000587470 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
VMP1-205ENST00000587470 M0QZ58 72 aa1.51□□□□□ -2.17
VMP1-205ENST00000587470 ATP5EP56381 51 aaPredicted RBP1.49□□□□□ -2.17
VMP1-205ENST00000587470 PLAC4Q8WY50 150 aa1.48□□□□□ -2.17
VMP1-205ENST00000587470 KRTAP8-1Q8IUC2 63 aa1.47□□□□□ -2.17
VMP1-205ENST00000587470 KRTAP12-1P59990 96 aa1.46□□□□□ -2.18
VMP1-205ENST00000587470 SERP1Q9Y6X1 66 aa1.46□□□□□ -2.18
VMP1-205ENST00000587470 ROMO1P60602 79 aa1.45□□□□□ -2.18
VMP1-205ENST00000587470 SPATA8Q6RVD6 105 aa1.44□□□□□ -2.18
VMP1-205ENST00000587470 A0A1B0GU69 56 aa1.43□□□□□ -2.18
VMP1-205ENST00000587470 LINC01558Q9Y6Z2 57 aa1.43□□□□□ -2.18
VMP1-205ENST00000587470 A0A0D9SG42 100 aa1.42□□□□□ -2.18
VMP1-205ENST00000587470 MT4P47944 62 aa1.41□□□□□ -2.18
VMP1-205ENST00000587470 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
VMP1-205ENST00000587470 BRK1Q8WUW1 75 aa1.39□□□□□ -2.19
VMP1-205ENST00000587470 PRR15LQ9BU68 103 aa1.38□□□□□ -2.19
VMP1-205ENST00000587470 C10orf95Q9H7T3 257 aa1.37□□□□□ -2.19
VMP1-205ENST00000587470 UQCR11O14957 56 aa1.36□□□□□ -2.19
VMP1-205ENST00000587470 KRTAP19-7Q3SYF9 63 aa1.36□□□□□ -2.19
VMP1-205ENST00000587470 MIR22HGQ0VDD5 57 aa1.34□□□□□ -2.19
VMP1-205ENST00000587470 MT1EP04732 61 aa1.33□□□□□ -2.2
VMP1-205ENST00000587470 INE1O15225 51 aa1.32□□□□□ -2.2
VMP1-205ENST00000587470 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
VMP1-205ENST00000587470 TNP1P09430 55 aa1.31□□□□□ -2.2
VMP1-205ENST00000587470 CDC42SE1Q9NRR8 79 aa1.31□□□□□ -2.2
VMP1-205ENST00000587470 KRTAP19-3Q7Z4W3 81 aa1.3□□□□□ -2.2
VMP1-205ENST00000587470 MT1LQ93083 61 aa1.29□□□□□ -2.2
VMP1-205ENST00000587470 MT1GP13640 62 aa1.27□□□□□ -2.21
VMP1-205ENST00000587470 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
VMP1-205ENST00000587470 MT1MQ8N339 61 aa1.26□□□□□ -2.21
VMP1-205ENST00000587470 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
VMP1-205ENST00000587470 KRTAP20-2Q3LI61 65 aa1.23□□□□□ -2.21
VMP1-205ENST00000587470 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
VMP1-205ENST00000587470 MT1AP04731 61 aa1.09□□□□□ -2.23
VMP1-205ENST00000587470 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
VMP1-205ENST00000587470 SYNE1Q8NF91 8797 aaKnown RBP1.08□□□□□ -2.24
VMP1-205ENST00000587470 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
VMP1-205ENST00000587470 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
VMP1-205ENST00000587470 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
VMP1-205ENST00000587470 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
VMP1-205ENST00000587470 PRM1P04553 51 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms