RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 COA5Q86WW8 74 aa6.64□□□□□ -1.35
PTBP1-208ENST00000585956 A0A1B0GU33 70 aa6.58□□□□□ -1.36
PTBP1-208ENST00000585956 KRTAP20-2Q3LI61 65 aa6.57□□□□□ -1.36
PTBP1-208ENST00000585956 H7BZZ5 65 aa6.55□□□□□ -1.36
PTBP1-208ENST00000585956 SERP1Q9Y6X1 66 aa6.55□□□□□ -1.36
PTBP1-208ENST00000585956 TMEM258P61165 79 aa6.52□□□□□ -1.37
PTBP1-208ENST00000585956 A8MU10 97 aa6.51□□□□□ -1.37
PTBP1-208ENST00000585956 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
PTBP1-208ENST00000585956 SEC61GP60059 68 aa6.51□□□□□ -1.37
PTBP1-208ENST00000585956 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
PTBP1-208ENST00000585956 TNP1P09430 55 aa6.41□□□□□ -1.38
PTBP1-208ENST00000585956 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
PTBP1-208ENST00000585956 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
PTBP1-208ENST00000585956 SYNE1Q8NF91 8797 aaKnown RBP6.36□□□□□ -1.39
PTBP1-208ENST00000585956 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
PTBP1-208ENST00000585956 SMIM26A0A096LP01 95 aa6.31□□□□□ -1.4
PTBP1-208ENST00000585956 KRTAP12-4P60329 112 aa6.27□□□□□ -1.41
PTBP1-208ENST00000585956 A0A1B0GU69 56 aa6.23□□□□□ -1.41
PTBP1-208ENST00000585956 RPS28P62857 69 aaKnown RBP6.23□□□□□ -1.41
PTBP1-208ENST00000585956 V9GYY9 64 aa6.11□□□□□ -1.43
PTBP1-208ENST00000585956 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
PTBP1-208ENST00000585956 PRR15LQ9BU68 103 aa6.06□□□□□ -1.44
PTBP1-208ENST00000585956 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
PTBP1-208ENST00000585956 AHNAKQ09666 5890 aaKnown RBP6.02□□□□□ -1.45
PTBP1-208ENST00000585956 Q1T7F1 81 aa6.02□□□□□ -1.45
PTBP1-208ENST00000585956 KRTAP5-2Q701N4 177 aa6.01□□□□□ -1.45
PTBP1-208ENST00000585956 MUC5BQ9HC84 5762 aaPredicted RBP5.99□□□□□ -1.45
PTBP1-208ENST00000585956 MUC5ACP98088 5654 aa5.98□□□□□ -1.45
PTBP1-208ENST00000585956 KRTAP5-8O75690 187 aa5.93□□□□□ -1.46
PTBP1-208ENST00000585956 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
PTBP1-208ENST00000585956 PSPHP1O15172 72 aa5.92□□□□□ -1.46
PTBP1-208ENST00000585956 MT1AP04731 61 aa5.85□□□□□ -1.47
PTBP1-208ENST00000585956 UQCR11O14957 56 aa5.83□□□□□ -1.48
PTBP1-208ENST00000585956 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
PTBP1-208ENST00000585956 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
PTBP1-208ENST00000585956 A6NED7 52 aa5.8□□□□□ -1.48
PTBP1-208ENST00000585956 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
PTBP1-208ENST00000585956 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
PTBP1-208ENST00000585956 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
PTBP1-208ENST00000585956 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
PTBP1-208ENST00000585956 KRTAP6-2Q3LI66 62 aa5.72□□□□□ -1.49
PTBP1-208ENST00000585956 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
PTBP1-208ENST00000585956 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
PTBP1-208ENST00000585956 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
PTBP1-208ENST00000585956 K7ERS5 55 aa5.62□□□□□ -1.51
PTBP1-208ENST00000585956 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
PTBP1-208ENST00000585956 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
PTBP1-208ENST00000585956 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
PTBP1-208ENST00000585956 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
PTBP1-208ENST00000585956 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
PTBP1-208ENST00000585956 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
PTBP1-208ENST00000585956 MT3P25713 68 aa5.31□□□□□ -1.56
PTBP1-208ENST00000585956 ROMO1P60602 79 aa5.26□□□□□ -1.57
PTBP1-208ENST00000585956 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
PTBP1-208ENST00000585956 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
PTBP1-208ENST00000585956 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
PTBP1-208ENST00000585956 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
PTBP1-208ENST00000585956 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
PTBP1-208ENST00000585956 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
PTBP1-208ENST00000585956 LCE1CQ5T751 118 aa4.65□□□□□ -1.67
PTBP1-208ENST00000585956 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
PTBP1-208ENST00000585956 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
PTBP1-208ENST00000585956 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
PTBP1-208ENST00000585956 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
PTBP1-208ENST00000585956 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
PTBP1-208ENST00000585956 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
PTBP1-208ENST00000585956 PHGR1C9JFL3 82 aa4.04□□□□□ -1.76
PTBP1-208ENST00000585956 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
PTBP1-208ENST00000585956 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
PTBP1-208ENST00000585956 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
PTBP1-208ENST00000585956 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
PTBP1-208ENST00000585956 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
PTBP1-208ENST00000585956 H3BS24 57 aa3.52□□□□□ -1.85
PTBP1-208ENST00000585956 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
PTBP1-208ENST00000585956 INE1O15225 51 aa3.26□□□□□ -1.89
PTBP1-208ENST00000585956 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
PTBP1-208ENST00000585956 PRM1P04553 51 aa2.7□□□□□ -1.98
PTBP1-208ENST00000585956 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 169.2 ms