RNA–Protein interactions for RNA: ENST00000585864.1

SEC11C-203, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11C, Length 1,088 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-203ENST00000585864 TNP1P09430 55 aa5.74□□□□□ -1.49
SEC11C-203ENST00000585864 MT1MQ8N339 61 aa5.72□□□□□ -1.49
SEC11C-203ENST00000585864 MT1LQ93083 61 aa5.71□□□□□ -1.5
SEC11C-203ENST00000585864 A8MU10 97 aa5.67□□□□□ -1.5
SEC11C-203ENST00000585864 PRR15LQ9BU68 103 aa5.67□□□□□ -1.5
SEC11C-203ENST00000585864 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
SEC11C-203ENST00000585864 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
SEC11C-203ENST00000585864 MT4P47944 62 aa5.63□□□□□ -1.51
SEC11C-203ENST00000585864 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
SEC11C-203ENST00000585864 ANAPC13Q9BS18 74 aa5.59□□□□□ -1.51
SEC11C-203ENST00000585864 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
SEC11C-203ENST00000585864 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
SEC11C-203ENST00000585864 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
SEC11C-203ENST00000585864 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
SEC11C-203ENST00000585864 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
SEC11C-203ENST00000585864 LINC01558Q9Y6Z2 57 aa5.48□□□□□ -1.53
SEC11C-203ENST00000585864 UQCR11O14957 56 aa5.44□□□□□ -1.54
SEC11C-203ENST00000585864 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
SEC11C-203ENST00000585864 CCDC179H3BU77 68 aa5.41□□□□□ -1.54
SEC11C-203ENST00000585864 KRTAP5-10Q6L8G5 202 aa5.39□□□□□ -1.55
SEC11C-203ENST00000585864 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
SEC11C-203ENST00000585864 K7ERS5 55 aa5.3□□□□□ -1.56
SEC11C-203ENST00000585864 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
SEC11C-203ENST00000585864 TMEM258P61165 79 aa5.29□□□□□ -1.56
SEC11C-203ENST00000585864 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
SEC11C-203ENST00000585864 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
SEC11C-203ENST00000585864 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
SEC11C-203ENST00000585864 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
SEC11C-203ENST00000585864 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
SEC11C-203ENST00000585864 KRTAP5-7Q6L8G8 165 aa5.24□□□□□ -1.57
SEC11C-203ENST00000585864 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
SEC11C-203ENST00000585864 V9GYY9 64 aa5.14□□□□□ -1.59
SEC11C-203ENST00000585864 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
SEC11C-203ENST00000585864 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
SEC11C-203ENST00000585864 PSPHP1O15172 72 aa5.01□□□□□ -1.61
SEC11C-203ENST00000585864 Q1T7F1 81 aa5.01□□□□□ -1.61
SEC11C-203ENST00000585864 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
SEC11C-203ENST00000585864 A6NED7 52 aa4.89□□□□□ -1.63
SEC11C-203ENST00000585864 MT1AP04731 61 aa4.88□□□□□ -1.63
SEC11C-203ENST00000585864 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
SEC11C-203ENST00000585864 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
SEC11C-203ENST00000585864 ROMO1P60602 79 aa4.82□□□□□ -1.64
SEC11C-203ENST00000585864 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
SEC11C-203ENST00000585864 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
SEC11C-203ENST00000585864 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
SEC11C-203ENST00000585864 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
SEC11C-203ENST00000585864 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
SEC11C-203ENST00000585864 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
SEC11C-203ENST00000585864 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
SEC11C-203ENST00000585864 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
SEC11C-203ENST00000585864 MT3P25713 68 aa4.53□□□□□ -1.68
SEC11C-203ENST00000585864 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
SEC11C-203ENST00000585864 PCP4P48539 62 aa4.25□□□□□ -1.73
SEC11C-203ENST00000585864 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SEC11C-203ENST00000585864 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
SEC11C-203ENST00000585864 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
SEC11C-203ENST00000585864 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
SEC11C-203ENST00000585864 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
SEC11C-203ENST00000585864 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
SEC11C-203ENST00000585864 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
SEC11C-203ENST00000585864 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
SEC11C-203ENST00000585864 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
SEC11C-203ENST00000585864 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
SEC11C-203ENST00000585864 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
SEC11C-203ENST00000585864 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
SEC11C-203ENST00000585864 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SEC11C-203ENST00000585864 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
SEC11C-203ENST00000585864 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SEC11C-203ENST00000585864 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
SEC11C-203ENST00000585864 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
SEC11C-203ENST00000585864 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
SEC11C-203ENST00000585864 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
SEC11C-203ENST00000585864 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
SEC11C-203ENST00000585864 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
SEC11C-203ENST00000585864 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
SEC11C-203ENST00000585864 PRM1P04553 51 aa2.4□□□□□ -2.03
SEC11C-203ENST00000585864 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
SEC11C-203ENST00000585864 INE1O15225 51 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 53.3 ms