RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 TNP1P09430 55 aa5.69□□□□□ -1.5
LSM12-202ENST00000585388 KRTAP4-3Q9BYR4 195 aa5.67□□□□□ -1.5
LSM12-202ENST00000585388 A8MU10 97 aa5.66□□□□□ -1.5
LSM12-202ENST00000585388 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
LSM12-202ENST00000585388 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
LSM12-202ENST00000585388 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
LSM12-202ENST00000585388 ANAPC13Q9BS18 74 aa5.58□□□□□ -1.52
LSM12-202ENST00000585388 CCDC179H3BU77 68 aa5.52□□□□□ -1.53
LSM12-202ENST00000585388 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
LSM12-202ENST00000585388 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
LSM12-202ENST00000585388 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
LSM12-202ENST00000585388 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
LSM12-202ENST00000585388 KRTAP5-7Q6L8G8 165 aa5.42□□□□□ -1.54
LSM12-202ENST00000585388 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
LSM12-202ENST00000585388 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
LSM12-202ENST00000585388 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
LSM12-202ENST00000585388 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
LSM12-202ENST00000585388 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
LSM12-202ENST00000585388 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
LSM12-202ENST00000585388 UQCR11O14957 56 aa5.28□□□□□ -1.56
LSM12-202ENST00000585388 TMEM258P61165 79 aa5.26□□□□□ -1.57
LSM12-202ENST00000585388 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
LSM12-202ENST00000585388 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
LSM12-202ENST00000585388 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
LSM12-202ENST00000585388 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
LSM12-202ENST00000585388 K7ERS5 55 aa5.12□□□□□ -1.59
LSM12-202ENST00000585388 PCP4P48539 62 aa5.12□□□□□ -1.59
LSM12-202ENST00000585388 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
LSM12-202ENST00000585388 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
LSM12-202ENST00000585388 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
LSM12-202ENST00000585388 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
LSM12-202ENST00000585388 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
LSM12-202ENST00000585388 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
LSM12-202ENST00000585388 MT1AP04731 61 aa4.95□□□□□ -1.62
LSM12-202ENST00000585388 H3BS24 57 aa4.92□□□□□ -1.62
LSM12-202ENST00000585388 PSPHP1O15172 72 aa4.92□□□□□ -1.62
LSM12-202ENST00000585388 Q1T7F1 81 aa4.92□□□□□ -1.62
LSM12-202ENST00000585388 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
LSM12-202ENST00000585388 V9GYY9 64 aa4.9□□□□□ -1.63
LSM12-202ENST00000585388 RPS28P62857 69 aaKnown RBP4.85□□□□□ -1.63
LSM12-202ENST00000585388 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
LSM12-202ENST00000585388 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
LSM12-202ENST00000585388 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
LSM12-202ENST00000585388 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
LSM12-202ENST00000585388 MUC5BQ9HC84 5762 aaPredicted RBP4.79□□□□□ -1.64
LSM12-202ENST00000585388 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
LSM12-202ENST00000585388 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
LSM12-202ENST00000585388 A6NED7 52 aa4.72□□□□□ -1.65
LSM12-202ENST00000585388 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
LSM12-202ENST00000585388 ROMO1P60602 79 aa4.69□□□□□ -1.66
LSM12-202ENST00000585388 MT3P25713 68 aa4.55□□□□□ -1.68
LSM12-202ENST00000585388 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
LSM12-202ENST00000585388 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
LSM12-202ENST00000585388 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
LSM12-202ENST00000585388 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
LSM12-202ENST00000585388 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
LSM12-202ENST00000585388 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
LSM12-202ENST00000585388 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
LSM12-202ENST00000585388 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
LSM12-202ENST00000585388 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
LSM12-202ENST00000585388 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
LSM12-202ENST00000585388 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
LSM12-202ENST00000585388 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
LSM12-202ENST00000585388 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
LSM12-202ENST00000585388 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
LSM12-202ENST00000585388 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
LSM12-202ENST00000585388 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
LSM12-202ENST00000585388 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
LSM12-202ENST00000585388 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
LSM12-202ENST00000585388 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
LSM12-202ENST00000585388 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
LSM12-202ENST00000585388 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
LSM12-202ENST00000585388 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
LSM12-202ENST00000585388 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
LSM12-202ENST00000585388 PRM1P04553 51 aa2.37□□□□□ -2.03
LSM12-202ENST00000585388 INE1O15225 51 aa2.36□□□□□ -2.03
LSM12-202ENST00000585388 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 74.8 ms